| Gene ID | Annotation |
|---|---|
| Am01G020320.1 | Lateral root primordium (LRP) protein-related |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G020320.1 | mRNA | Chr01 | 133013694 | 133016301 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF05142.15 | DUF702 | 122 | 259 | 3.30E-62 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| GO term | Description | Category |
|---|---|---|
| GO:0009734 | auxin-activated signaling pathway | Biological Process |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0008168 | methyltransferase activity | Molecular Function |
| GO:0045893 | positive regulation of DNA-templated transcription | Biological Process |
| GO:0032259 | methylation | Biological Process |
| InterPro term | Description |
|---|---|
| IPR006510 | Zinc finger, lateral root primordium type 1 |
| IPR006511 | SHORT INTERNODES, C-terminal |
| IPR007818 | SHI protein family |
| trEMBL term | Description |
|---|---|
| A0A1S2YSR6 | _ |
| SwissProt term | Description |
|---|---|
| SRS1_ARATH | Protein SHI RELATED SEQUENCE 1 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G51060 | Lateral root primordium (LRP) protein-related |
| Medicago sativa L. | MsG0880045674.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g49830.1 | SHI, putative, expressed |
| Cucumis sativus L. | Csa020675 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000073s00007821.1 | _ |
| Codonopsis lanceolata | Cl_chr02_28310T | _ |
| Arachis hypogaea L. | AH01G01090.2 | Protein SHI RELATED SEQUENCE 1 like |