Gene detail

Detail information of Am01G019160.1 Annotation

Gene ID	Annotation
Am01G019160.1	basic chitinase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G019160.1	mRNA	Chr01	124005249	124007313	+

Sequences

CDS:

>Am01G019160.1
ATGGGAAACATAAAATTGTCTTGTTTGATACTATGTTTATTAGCTTTCTTGGTTGGAACGATAGCAGAACAATGCGGTAAACAAGCTGGTGGAGCTGTATGCCCAAACGGTTTATGTTGCAGCAACTATGGTTATTGTGGTACCACAGATCCTTACTGTCTAACAGGTTGCCAGAGCCAATGTAGAGGTTCAACACCATCCACACCAACCCCAACAACACCAACACCAACCCCAATAACACCTACAGGAGGTGGTGGTGGTGGTGGTGGAGATGTTGGAAGGCTCATTCCTAATCCTCTCTTTGATCAATTGCTCTTGCACCGAAATGATGAAAGATGTGCAGGGCATGGATTCTACACATATGATGCTTTCATTGCTGCTGCTGGTTTTTTCAATGGCTTTGGAACTACCGGTGACGATAACACCCGCAAGAGAGAGCTTGCTGCTTTCTTGGCTCAAACTTCTCATGAAACCACTGGAGGGTCAGGGTGGGCAACTGCGCCAGATGGTCCATACGCGTGGGGATATTGCTTTGTCAATGAAATTGGTGCCCAGGGAGAATTTTGCGAAGCAGGATATCCATGTGCTCCTGGTAAAAAGTACTATGGTAGAGGACCAATCCAACTTACTAATAACTACAATTATGAGCTAGCGGGTAAAGCTATTGAAGAAGACTTGATAAATAATCCGGATTTAGTATCCACAAACCCAATTGTATCATTCAAGACAGCAATATGGTTTTGGATGACTCCACAAGCAAACAAGCCATCATGCCATGACGTGATTGTTGGAAAATGGACCCCATCTGGTGCTGACAGCTCAGCGGGGCGGGTCCCTGGATATGGTGTGATCACCAACATAATCAATGGTGGGGTTGAATGCGGGCGTGGGCCGGATCCTCATGCTGACGATCGAATCGGGTTTTATAAAAGGTATTGTCAAATATTGGGAGTGAGCCCTGGTGACAACTTGGATTGCAACAACCAAAGCTCATTCGCGCAAATCCCATAA

Protein:

Promoter(3k):

>AM01G019160.1
TGTGGTTGGTCAATACTTAGCTCAAAAAGTTTTATATCTGCTAACCAGTGAAAATATCCCAAAACGGTTGTCCACTCTGGCTCACAATTACAATACACAAGATCCTTCCCACAAATATCACAATAAGTGTATGTCACACAATTGTCATTTAAATGTGGTTCTCCACAAAAATCACAACGAAGTGACTGTAGCGTGGACTCCATAACTTATAGAGATTTCACGTGGCTTTCATAGAATCAAGGGAGTGGTACTAATAAAGAGATAAAAAAATAACTTAAAAATAAAATTCAATCTAGTAATTAAAGATTAAACTGATAAAAATTGGCAATCCCCGGCAACGGCGCCAAAAACTTGTTAACTTTTCAGCAAGTGTACCGAATCGTTGCAAGGAATATTAAAACGGTAAGACCGAGTGTCGAACTCAGGGATTGCGATTAATTATCAATTTAATTAATTAATTACTAAAATGTTTAAAATAAGGAGTGATAGATAGTAACCGAAAAAGATCAAATGTGAGAATAAAATGAGAGAGTAAAAGTGGTTAGGAATCGAATTCTCTCCCCTACACTATCATGCACTATACCATCAATCAATTCCAATTTAATTACCAAATAAAAGATTCAATTCAACTATTACAGATTAAGGACAATCCCTTGCCTTAAAATCCCTTTTATCTAATGGGAAACCGTAATTCCTTAAGTGTATCGCCACTAAACAAAGCATTAAACGTAGAGAATTAACGGAATTCATGATACTAATGTCATATTCCTATAATCATCACACTCATGGCCTAAAATCCCAATATTTGGAAAACATAACTCATCTCCCAATGGTGAAAGTAAACCCTAATTCATTACAACAACAATAATTATTGTAAAGCAATAAGAACGGAGGTAAAGGCAAATTTAAAAGGATAACTAAATTGTATTGATCATAACAATGGAATCACATGATAGTTTTGGAGAGATTCATCTCCTCCTAACCATAAGAAATTTTGCTACTCACGTTCAAAGGTTTGAAAGAAAAGGTAAAAGAGAAGTTACACAAAGATGAGTACATCGGATCATTCAATTCCTTATTCCCAAGTGTAGAGAAACTCTAATTCTTCTCTTTTTCGCAACTCTAAACCCCCTTTTCGAAACCAAGACCAAAAGTGCCCCAATTTTCTGATTTTTGGGCTTAAATACTGAAATCTGCAGTCCATCGCGACGCGATAGACAGATTTTTGCCTTGATCGCGAGGTGATGCATGCTGGTCGCGAGCCGATAGGGACCAGAAACCTTTTTCATTTTTCTGCTGCGATGCTAGGCAAGCTGTCTAGTTCGCTAGCCAACGAAACATCAAATTGAAGATTTTGTCTTACTACAACCATTTGAAAAGAGGGCAACAACTTACAACTCAATCCTAATGACATCAATTGCAATCTAAGCTTTTTCCCCTTGGAAATTAACTAAAAAACACACAAACACTCGCATTATGACTGTAAAACTGAGCAACGGTATACATATGACCATGAGTCAACATTGAGTTTGCTAGGAGGAATGCTAACAAGGTTGCTCATACACTTGCGGGGGTGGCATTGTTATCAGCTAGTCCTCAAGATTATTATGATGTTCCTACATGTATCTCAGATTTAATTATAAATGAATTGCACTAAGTGCCTTTTGAAAAAAAAAAAGCTTCATAGATATAAATAGATGTCAATTATCACCACGACGATATGAATTAACTCCCTAGCTAAAGTTAGATTAACTAGCACTATATAGCTTATAAAAAAAACTAGCACTATATAGCTTATAAAAAAAACTAGCACTATATACACATAAATACACATTAAAAAGGTACCAAGATGAATAAATAATAAGACATCAAAAAAAAAAAAGATGAATAAATAATTATTTACAGCAAATGTATAAATAATTTTGAAATTATAACGTAAACAACACGGGGGAGGGGAGGGGAATTCAAAGAGTGTCTCTCATTTCTCCCCCACAAATTAAGGCAACAACACTAGATCATCTTTAAGCTCTTGTCTTGTAGTGACGATGAACACTGAACCTAACATATAATTTGTGGTTTGAGTTAGTCAAAACTCAAAACTATCTTTACATGAAGTAGCCCCAACGTCTACGTTGTGAGGACTATCCTGTTGACCACTTGACCTAAAGCCATACGAGATAATATTTGAGATTTTATTTTCTTATAGACTTCTACCCTTCTTATAATAAAAAATAGTGTTACGACCTGATTTAAGATTAAAAAAAAGTCATTTTCATAAAAAATAATTTAGAAATTGTATTTTTTAGATATTTTTAATTATATTTTTTTTCAAAAGAAATGAATATGGAGTCTCGTTAAAATATTTTGATGCAAAACTCTCCTTAAGAAAAAACATCAAGAAGGAGAAAGAGCACTCCACAAAAAAATTGGGGGGGGGGGGGGGGGGGAGGGGGGACTAGACCAATACCATTGAACAAGAATAACGTTATAACCAAAAGTAAACAAAAGTAATTCAATTAAAAGGAAACTAGTTTGAAGAATCTCTATAATGACATGCAAAAAGATCGCTATAATGACTCACATCCTAACCAAGTTGACAACAAAGCCATTAACAATCATTTGCAACACACCGAATGCAAAAGGCAAAAAGAAAACCTAAACCATCAGACAAGAAAAACCTAACCTATTTCTAGAAAAATCCTTATCTAAATTTTTAAATAACATAGAAACTAGTATGTATTGTATATTCATTCTTCTAATCCACTCTCTAATCTTCACATTCATAAAACAAGAGCTTTTTCTAAAGGAGATGTGTAAGGCTAAAAATTGAAAATGTGTAATTTATATTTTGGACTTCAGCGGTGTCTCGGTGTCCTCTAGTAACATCAGCCAAGTTGAAAATGAGTAATTAAAAAAAAATAATTAATCCCATGGGAGCTCACCTATAAATATCCTCACCATCCTAGTGAAACATACACCAACTGATCACTCACCTTAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00182.22	Glyco_hydro_19	96	326	6.40E-124
PF00187.22	Chitin_bind_1	24	61	7.40E-14

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	CBM18

Gene Ontology

GO term	Description	Category
GO:0008061	chitin binding	Molecular Function
GO:0016998	cell wall macromolecule catabolic process	Biological Process
GO:0006952	defense response	Biological Process
GO:0009620	response to fungus	Biological Process
GO:0005975	carbohydrate metabolic process	Biological Process

InterPro

InterPro term	Description
IPR023346	Lysozyme-like domain superfamily
IPR000726	Glycoside hydrolase, family 19, catalytic
IPR016283	Glycoside hydrolase, family 19
IPR036861	Endochitinase-like superfamily
IPR018371	Chitin-binding, type 1, conserved site
IPR001002	Chitin-binding, type 1

trEMBL

trEMBL term	Description
Q7X9F6	_

SwissProt

SwissProt term	Description
CHIX_PEA	Endochitinase

KEGG

KO	Description	Enzyme
K20547	basic endochitinase B	[EC: 3.2.1.14]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G12500	basic chitinase
Medicago sativa L.	MsG0880045572.01.T01	_
Oryza sativa L.	LOC_Os05g33140.1	CHIT5 - Chitinase family protein precursor, expressed
Cucumis sativus L.	Csa015658	_
Glycyrrhiza uralensis Fisch.	Glyur000120s00006050.1	_
Codonopsis lanceolata	Cl_chr01_31930T	_
Arachis hypogaea L.	AH13G00300.1	Endochitinase like

Expression pattern