Gene detail

Detail information of Am01G018880.1 Annotation

Gene ID	Annotation
Am01G018880.1	glutamate receptor 3.6

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G018880.1	mRNA	Chr01	121305326	121310484	-

Sequences

CDS:

>Am01G018880.1
ATGATTAGAGTTTTGGTTGTGATGTTGATGGTTCTCTCAAATTTGCTCTCTTCAACTGGGATTGGCTTAGATAATTCAACAGTATCAGCTTTTGTAAATATTGGGGTTCTTTACTCTTTCAATACCAGTGTTGGTAGAATTGTGAAAATTGCTGTAGAAGATGCAGTTGATGATGTAAATAATGATCCCTCAATTCTTGGTAAAACTAAGTTGAAGGTCTCATGGCAAGAAGATTCAAAGTATAGAGGGTTTTTGAGCATTGCTGAGGCCTTGCAGCTCATGGCAACACAAACTGTGGCCATAATAGGCCCTCAAACTTCTACAACAGCTCATGTTATATCTCATATAGCAAATGAGCTCCAAGTTCCTCTACTATCATTTACAGCCACTGATCCTACCCTTTCTTCGCTTCAATTCCCATTCTTTGTTAGAACTTCTTTCAGTGACATTTATCAAATGACAGCAATAGCAGACATTGTTAACTACTATGGTTGGAGAGAGGTTATTGCAGTCTATGGTGATGACGATCACGGGAGGAATGGAATTGGTGCGTTAGGAGATAAGCTCGCCGAGAGACGTTGTAAGATCTCGTATAAAGCGCCAATGACTCCTGAGGCAACTAGAGAGGAGATTACTGATGCACTTGTTCGGGTAGCACTTGCAGAATCTAGGATCATAGTTCTTCATACAAGTACAACTTGGGGTCCAAAAGTGTTGAGTGTGGCAAAATCTCTTGGAATGATGCAAAATGGTTATGTTTGGATTGCAACTACTTTTCTCTCTTCTTTTCTGGATATAGAAAGTCCTCTGTCTTCTGATACAATGGATAACATCCAAGGAGTTATTACATTACGAATGTACATACCGGATTCAGAGCGCAAACGAAAATTTGTTTCTAGGTGGACAAACTTGACTAGTGGAAAGAGTTCAAATGGTTCCCTTGGTTTGAGTACTTATGGTATATTTGCATATGATACCGTTTACGTGCTTGCTCGTGCGCTTGATACGTTTTTCAAACGAGGGAACCGAATTACGTTTTCGCACGATCCTGTATTATCTAAACTACATGGAGACATGAACCTTGATGCTGTGAAAATCTTCAATGAAGGAAATTTATTGTGTAAAAGTATTTATGAGGTTAACATGACTGGTACATCAGGTCCATTCAGGTATACACCTGATAAAAATCTTGCTAATCCAGCTTATGAAATCATCAATGTGATTGGAACCGGAACTCGGCGGATCGGCTATTGGTCTAATTACTCCGGATTATCGATAATTCCTCCAGAAACGCTTTATTCAAAACCAACTAATCGTTCCAGTGCGAATCAGAAGCTACTCACTGTGTTTTGGCCAGGAGAAACAACTCAGAAGCCTCGCGGTTGGGTTTTTCCAAACAATGGAAGGCTGTTAAAAATTGGGGTACCGAACAGAGTTAGTTACCGTGAATTCGTCTCTCAAGTACAACAATCCACTGACATGTTCAAAGGATTCTGCATTGATGTATTTCTTTCTGCAGTAAACTTGTTACCTTATGCTGTACCCTATAAATTTATTTCATATGGAGATGGTTACAGCAATCCTAGTAACACTGAGCTTGTGCGTCTGATCACTGCGGGTGTCTTTGATGCTGCAGTAGGTGATATTACAATCACTACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATACATTGAGTCTGGTTTAGTCGTGGTAGCACCGGTTAAGAAGACGGATTCCAATGCTTGGGCATTTTTGACACCATTTACACCAATGATGTGGACTGTCACAGCTATCTTTTTCCTACTAGTAGGAGCTGTTGTTTGGATTTTAGAGCATAGACTGAACGATGATTTTAGGGGACCTCCTAAAAAACAAATAGCCACAATTTTATGGTTTAGTTTTTCAACTATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACTCTTGGTCGTTTTGTGCTGCTTATTTGGCTATTTGTAGTTCTGATAATTAACTCAAGTTACACAGCAAGCTTGACTTCAATCCTCACGGTGCAACAACTTTCTTCATCTGTTAAAGGCATTGAAAGTTTAACAAATAGCAAAGAGCCTATCGGTTACTTGCAGGGTTCTTTTGCTCGAGCTTATTTGATTGACGAAATCGGTATTAATGAATCCAGATTAGTTCCTCTAAAAACACCCGAAGAAACTAAAAAAGCATTGGAAAAAGGTCCTCAAAAAGGTGGTGTTGCTGCATATATCGACGAGCGTGCTTACATAGAACTCTTCCTTTCAAGCCGGTGTGATTTTTCTGTTGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCGCGGGACTCGCCATTGGCGGTTGATCTGTCAACTGCAATTTTGGAGTTAGCAGAAAATGGAGATTTACAAAGGATTCATGACAAATGGCTTTTGAGCAGTGCTTGTCTATCACAAGGTGCAAAGCTTGAAGTGGACAGACTCAATCTCAAAAGCTTTTGGGGTCTCTATCTAGTATGTGGTTTGGCATGTTTACTTGCTCTACTGATATATCTTATTCAGACACTGAGGCAATACAAGAAACACAATCCCCCAGAGGAACTTGAGTCTCCTGGACAAGGCTCGGGATCGTCACGCCTACGGACTTTTCTTTCATTCGTAGATGAAAAAGAAGAGATTGTTAAGAGCCGTTCTAAGAGAAGGCAAATGGAGAGGTTGTCATATAGAAGCACAAGTGAAGTTGGATCAACTATCATCTCTAATAAAGAATATTCTCAGTCATCTTCAAATAGAATTGATTTGGCTAATGAAGTTTGA

Protein:

Promoter(3k):

>AM01G018880.1
GATGCTCAAGTCAGTATCGTAAAGTCTGTTGTGAGGTATGGATGAAAAAACGTACGTGGGTTAGTGATCGTCGAGGTATTTATAGGGATTGTAGGTCATGTCGTGATGGCCCACGTTGTCGGATCCGAGCGGGTGATCGTAGCCCTTGATGCCCACGTCGCATGGATCGCGATCTGTGCCTTAGGTCGTAGGTACTGTCCGCGCTGATCCAGGTCGTACGATATCTTACGTGTGGATCTCAACCGTCCAATCATCATGACCAGGATGACGTTGCGCCAGGTAGCCAAGGCGCTGCCAGCACTTCGAATCGAGTCTAAGCTCGGTCCAGAACAAAAATAATGGTGGATCCCGTATAGATAGAGGGGGGAGCTGCACAAGGACTCCTCTAAATAAGTACTACTACCATGTTTTTATTCTTCCCAATAATTAATATATGATATTAATGCTTATCAGGTAAGAACCCAATAAGCACCACCAGAGATGACGGTATACTCGAGTACGGTAGAAGTTGATTATTGGGGTGAAAGGGTCATGATCACTTCCCGTTTGGTAGAGCAAGACAATCACCGAGTACGGGAAGGTCCCATTAGCTACTATTAGCTATACTAGTATTTTACCACAGGTGATACTGTATTTGTTATAATTTGCTACAAAATTATAAATACGTTGAAAGTTATAAAATGTAATAAAAGAAAAAAGAAAAAATTATATTTCACATTTATTAAAATAGTTGTGTTGGAAAAAATTTCAAAAAAGTCGGTATCTTATTATAATATTAATAATGAAGTAAAAATAGTAAAAAGGAAAATGAAATTTAATATAAAATATGTACCACGCTCCCTTTGATGCTCCCGTTGGAGCCTCGTGGTCTCTCTCGTTGCCGCTCTCGTTGGCGCTTTCGTTGGCGCCCTCGTTGCAGCTCGCGTTGCCGCTCACGTGCGGCTCAAAAAAAAAGCAAATGAGATTTAATTATTGATTCTTTTAGGAAAAATGATTGTGGAATTTTTGCTAGCGGTATCTTTTTTTTGGACAATTGTGGTGGTTAAATTAATTGATTTTAGTAGTTTAAGTAGATTACAGTAAATAGTAAATTCTACGTAACTTAATATTAATTTACTAAATTTTATGTAGTTATTGATTTTTTTACAAAAAATAGGTTAAAAAAATGAGTAGATTATTGATTTTTAATATAAAATATGCACCCCGTTGGCGCTCCTATTGGGGCTCCCGTTGGCGCTTTTGTTGGTGCTCCCGTTGCTGCTCTCGTTGGTGCTCCCGTTGCTGCTCTCGTTGCCGCTCTCGTTGTCGCTCCCGTGCGGCTCACATAAAAAAAAGAAGAAAATGAGATTTAACTATTGATTTTTTTAAGAAAAATTATATTGGAATTTTTGCTAGCGGTATCGTTTTTTGATAATTGATAGTGGTTTGTTTGAGTAGATTATAGTAAATTCTATTTAAATAAATTGATTTAGATATTGATTTTTGACAAAAAAAATGATTTAAAAAAAAGGAAAAAATAAAGTTCTGATATATTTTTTGTTGCGTTTCGCAGTTTTTTTTTTGCATTTTTAATATTATTTTTTTGTTGACTTTTTTAGTTTTTTGCAGCAGCTTTTTGTCATTTAGTGGTCTTTTTATCAAAATATCCAAAAAAAAATGACACATGGCAATTTTTGAATATGTCTAAAATAGACATTGTGATGACACTTAAATTTATTACTACATTATAATTATAATTATAATATAATATATAATATATATATTTTTCTCATTGATTTTGGACACTTAGCAATTGTATAAGTGGCCTATTTTTGACATTTTTTTAGCATATGAAATGATTATACTATAGTATTAAATTAGTATTAGATATTAGATTAGATTAGTATTAAATAAATATGTTTGAAGTGGAATAAAATAGAAGTAAATTAGAATAAAAAGAAAGGGAAGAAGAAAAAGAAAAAGAAAGGAAAGAGGAGAGAGAGAATATTATGAGAGAGAAAAGAGAATAAAAAAAAGAGACATAAGAGAGATGATGGGAAAGAGAGGAGAATAAAATAAATAAATAAAAAAGAGAGGAGAGAGATGATGAGAAAGTGCGTAAAAGAAAAAGTAAAAAATTGTGAAAAGATGAGATTTTTTGTCTTTTAGTGGCAATTTTACATTTTTATCATTGATTTGAGACACCTGACAACTATATAAAGGAACTACTTTTGACATTTTACTAACATATAATTTTATTATATTAGATATTATTATACTAGATATTAAATTGACATTTTGCTAGCATATAATTTTAAAATATATTAGATATTAGATATTAGATTAATCCCGAGAGAAAGTGTGGCCAATCACTGCCTTCACAACAAACAAAATATTTTATATCTGCAACTTGGACCTCTGAAATATTAATAACTGCCATTATAATATAGATCTTTGCCACTAAATTATTTGTCCATAAAATTCAGCAATCGACACCAACTTCAGTGCATTACAACTACTCTTTTCTTTATTTCTCAATTTTTTCTACTTTTCTTTCTACCCCAGGTTTCCAATATCTCAATCATCCAATACCACTTCTCATTTTGCTTCTTTCTTGTTAAAGTTTATGTCTTTTGTTTAGGTATTAATGTAAAGTTTATCTTTTTATGCTCCAATTTAACCCAACATCAAGTTTTCTGCACCATATTGGTTTCATTAAGCTCCTGTGTTGTGAACCAAACTTCAGGTACATTTATGATTTATCTTTTTAAATTAAGTCTTGTTCTTCACTTACTGTTATTTTCACTTTGCAAAATGATACCTTTTTTCTATAATTGGAGAGAGGCACTTTAATGCTTTATTCTTAACCATCTTTGTTGTGTTTGAGATGTGCTTTGTGTCTCAATTTCATAATGATATTTAATTTAGCTTCTTCCTTTCTTACTAATCATTTTTTACTTCATTTTTTGAATTACTTGTTTGTTACTACTTGGTGAGGTTTGAATAGGCAACTGCAAAACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01094.31	ANF_receptor	49	409	1.90E-76
PF00060.29	Lig_chan	594	845	3.60E-34
PF00497.23	SBP_bac_3	529	812	8.00E-21
PF13458.9	Peripla_BP_6	34	407	4.20E-18
PF10613.12	Lig_chan-Glu_bd	488	574	2.00E-10

Gene family

Gene family	Subfamily
Transporter family	GIC

Gene Ontology

GO term	Description	Category
GO:0015276	ligand-gated monoatomic ion channel activity	Molecular Function
GO:0034220	monoatomic ion transmembrane transport	Biological Process
GO:0005886	plasma membrane	Cellular Component
GO:0038023	signaling receptor activity	Molecular Function
GO:0007186	G protein-coupled receptor signaling pathway	Biological Process

InterPro

InterPro term	Description
IPR001638	Solute-binding protein family 3/N-terminal domain of MltF
IPR001828	Receptor, ligand binding region
IPR044440	Plant glutamate receptor, periplasmic ligand-binding domain
IPR028082	Periplasmic binding protein-like I
IPR017103	Ionotropic glutamate receptor, plant
IPR001320	Ionotropic glutamate receptor, C-terminal
IPR015683	Ionotropic glutamate receptor
IPR000337	GPCR, family 3

trEMBL

trEMBL term	Description
A0A1S2YT22	_

SwissProt

SwissProt term	Description
GLR36_ARATH	Glutamate receptor 3.6

KEGG

KO	Description	Enzyme
K05387	glutamate receptor, ionotropic, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G51480	glutamate receptor 3.6
Medicago sativa L.	MsG0580025215.01.T01	_
Oryza sativa L.	LOC_Os04g49570.2	glutamate receptor, putative, expressed
Cucumis sativus L.	Csa000518	_
Glycyrrhiza uralensis Fisch.	Glyur001376s00030053.1	_
Codonopsis lanceolata	Cl_chr01_35670T	_
Arachis hypogaea L.	AH20G01040.4	Glutamate receptor 3.6 like

Expression pattern