Gene detail

Detail information of Am01G018780.1 Annotation

Gene ID	Annotation
Am01G018780.1	eukaryotic translation initiation factor 3G1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G018780.1	mRNA	Chr01	120173122	120175489	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G018780.1
TCATCTAACTGCATAACAAACAACTTCTAACCAACAGTAAACTAACTCAACAGTAAACTAACTCAATCAGTAACTATGGTTAAATTACAGTGAGTTTACAAAGTAAATTAAAATATATTAACTCTATTAATCTTGAAATAAAATAACGGAGACTGTCTTGAATCTTTCTACCTTCAATGCATTTCTAACTCCTAAACATACCAGAATGTTGAAGTGTTCTGTAGTACTCCCGTATCTTTGGGGAGTTTTTAATCTGTTCCCATATCTTGGCTGAAATTTTCAAGCGTGAAACCGGTCTTGTGAAAGATGGTGACTTCATGAATAAAATAAAATCTGACAAATAGGTAAACATATCACTTGTGTCCTAAATTTTGGTGATTAGTAAAACTAACTAACTGGGTCTACAAGAAAGGAGGCGATATGGTTATAGCAAAAGAGAAAACGTGACAAATCCTACAATTCAGTAAATGTAGGTATTCATATGTGTGCATGGAGAGAGAAAGAGCGACCTGATCCTGTAATTTCCATAGTGCAGAAATGTAACTCTCATGCTGAGCTCTTGAATTTTCATCTTTTTTCTTAAATGGGATTGCAAACAAATTCAGCATGTTAGAATCCATGTGTCCACCATGAAGCATAGAAGATGAAACATGCTCCTCGGGCTTGTTTCCAGCGTGTTCTCTAACAAAAGAGGATGGTTTCAAATGCTGCATGAGTGCCTTCCTCAAATGCAAAATGTTTTTAGGAGTGAACTCTTAATTTTGTAGCCTCTAGCACAAGTCAAATCGGTGGTGGCTCTGAGCATGGGCAGGAAGGGCGACCGTCCGGTCCCATTTTTTGAAGGACACCAAATTTTGATTTCTTACTAGTATATATAGATATTAAGATAAAAAATATAAATTTAAAAGTAAATAATAGTTTTAAAGGTTTTAACATTGTATCGTATTATGTTCTTTGAAGATATCTATTTGTTTTTCTAATGCACACAACTTATACAAGTTGGCTTTAATGCACTTTTGACCTCCCTAATTTAATTGAAACGAGATTTTAGTCCCCAAATTTCAAAATCTAGGTTTTTGCTCTCCCAGTATCATACATTGTTACAATTTTTGTTCTAACCCATATTGTTGGGTCCAAAAGTGGTTACTTTTTGGCATAAAAGTAGTGATTTTTGGCCCTAATTTTACATCTAAAGAGAATATGCAAAAAGTTATCACTTTGAAGGATAAAAAAAGTCACCTTTTTTCTGGTAAAAAGTTTGGGTTAGAACCAAAATTGCAACAATGTGTGGAATTTGGGGACCATAAACCCAAATATCGAAATAGGGGGACTAAAATCCTATTTCACGAAAATAAGGGGACCAAAAGTATATTTAAATCTAAAATTAACTATTTATCTCACTGTTGCACTATTCGAAGAAGGATTTCTTTATTGAATTTGCAATTTACTATGTCATAAGATAGATTTATCAATCTTGCTTTCATTTATGTAAAAATGTTTTTAAAGTAACATTAAATTATAAATAATTTATTAATGATTTTCACAACAAAATATCTAAGAAGAATATTATTTAAAAGGATATAGGGGCACCATCTTTTGGGTTTGCCCAGGGCACCACAAATCTTAGTATCAGCCCTGAGTCAAATAAAGTAAAGATGAGTGTTTCACTATACCGTGGATATAACATGAGAAAGGAGACTATATTATTATGCAAGTGGATGATAGATAGATGATTATTTTGCTTTTTAACCTCTATGAGGAAACATTATATATGATTTTGATGTAATTTTATCCCCTTGTAACACAAATCAAATTGATAAATATCTTTAATATTTATAATGATTATTTTGCTTTTAATCCCTACAGGAAACATTGCAGATTGTAATGTACTTATATCAAAGATGTCAAGAGCAACTATTGATTATTTTTTTTATAAGGAGAAACTTGTTATGAATATTAGTTATTTAGTGGATGCCCATCTTGATCTTCCACTTTCCCTTAACTCCAATTCTTGAGTGGATTATTAGTGACATTTACTTTGATCTTTCACTTGCCCAGTTGTGTCCTATAGATAAGACTCATTCTATTGTAAACAATGACTAGTGAAGAGAATAATACAAAGCTCTCATATTCTCCATATTTTTCTTATTCTTTATATATTCTCTCATTCTCTTGTTCTTCTTCCTATAATTTTGGTTATTTTTATAACAAAACTACTGATTATTGGTTATTAGAGTGCACTTCTTTACATTTGCAATAGACACCCACTCAAGGATAAGCCATGGTAATTTTTAGAATACTTACCATTTATCAAGATAGTTATGGAAGATCATTTATCTGGTTTAATGTAGTATTTCTATTAACCGAATTGCGCAAAAAGACAAAAACATTTTGTTCCAAGGATGAATTTGTTTTAAAGCATCGGAAAGTCAATCAAAGTATATTTCAAGGTGTTTTCTTTCAGACTGCTAAACACTAAATGTTCTCGGAGTAGCCCAATAGAAGGAGTTTTGGAAATTGATGTTAGATTAATTGGAAAGATCTTACTCAGTGGCGACGGCCTAGTTCACAAGGGCCTAGTTCTCACTACTAAATTACTTGTGAACTAGGCCCATAAGGTGTTCCGCAGAAAAAAACTGAAGGAACTTACTTCCGCATGCCAACACAAGGAATATGGAAGTCGGTATTTTTGAGGAGACAAAAACGGAACTAGGCACTTCCGTGAGGCTGAAAAACAGATCTATCTCTTTCTCTCCAACAAATTTAAGTGAAAAATGATAAATGTTTTAAACTTTTGTAAAAAATTTAAAGGTATTTTCGTCATTTTACATCTGGCGTGCGGGGGGTGGTACCGTGTATATGTGGGTTACCCAAAAAAAACCAACTTATTAACTAAAAAACCCCAAATTCACCGAACAAAGAAAACTCTCGAGACCATTACACCGTGTGACAAACACACAGTCGTTACCGAAGGTACAGCAGGGAGATTAAGGTACAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF12353.11	eIF3g	33	158	8.00E-35
PF00076.25	RRM_1	212	278	5.50E-20

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0001732	formation of cytoplasmic translation initiation complex	Biological Process
GO:0003743	translation initiation factor activity	Molecular Function
GO:0016282	eukaryotic 43S preinitiation complex	Cellular Component
GO:0005852	eukaryotic translation initiation factor 3 complex	Cellular Component
GO:0003723	RNA binding	Molecular Function

InterPro

InterPro term	Description
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR024675	Eukaryotic translation initiation factor 3 subunit G, N-terminal
IPR017334	Eukaryotic translation initiation factor 3 subunit G
IPR034240	eIF3G, RNA recognition motif

trEMBL

trEMBL term	Description
A0A8B8LXJ3	_

SwissProt

SwissProt term	Description
EIF3G_XENTR	Eukaryotic translation initiation factor 3 subunit G

KEGG

KO	Description	Enzyme
K03248	translation initiation factor 3 subunit G

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G11400	eukaryotic translation initiation factor 3G1
Medicago sativa L.	MsG0080048933.01.T01	_
Oryza sativa L.	LOC_Os02g54700.2	RNA recognition motif containing protein, putative, expressed
Cucumis sativus L.	Csa014943	_
Glycyrrhiza uralensis Fisch.	Glyur001818s00030079.1	_
Codonopsis lanceolata	Cl_chr06_27520T	_
Arachis hypogaea L.	AH13G43950.1	Eukaryotic translation initiation factor 3 subunit G like

Expression pattern