Gene detail

Detail information of Am01G017680.1 Annotation

Gene ID	Annotation
Am01G017680.1	UBX domain-containing protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G017680.1	mRNA	Chr01	115271478	115277481	-

Sequences

CDS:

>Am01G017680.1
ATGGAGGGAGTGATTTCTGCCAATGACCAGCAATCATTGGTCTCTTCCTTCCTCGAGGTCGCTCAGGGCCAAACCTCCGAGACCGCTAGACAGTTCCTTCAGGCCACAAGTTGGAGACTCGAGGAAGCTCTTCAGCTGTTCTTGATTGGGAGTGAAAGTGGGGCGGTGTTGCCACCGCCAGTGTCACACACTCCACCTTTAGAAAATGTTGATTCCTGGACTGATCTACCACCTTCAATTGAACCAAGGCAGGATACTGCAAATCAAAGTGGTGGCCACAATGATGGAGATGAAGTGCGCCCTCCCTTACCTGTAATAAGAGAAACTCTTTATGATAATGCAATGCTGTTTGGAGGATCAAGAACTGGACATCGTCCACAGGAACCGAGCTCCTTAATTGCATTTCGTAACTTTGAAGAGGAAATGAGGCGTCCAGGGGTTTGGGAACCAGAGCAAGGTGCTACCTCTACGCCTGAGAGTTCTCGGGATAATCTTGCTTCTCTTTATCGCCCTCCTTTTCATCTAATGTTCACAGGTTCTTTTGATAAGGCAAAAAGTGCTGCTTCTATGCAGGACAAATGGTTATTGGTGAACATTCAATCTACCAAGGAGTTCAGCTCACATATGCTTAATCGGGATACATGGGCCAACGAAGCTGTTTCTCAGACCATTAGTACAAACTTCATATTCTGGCAGGTATATGATGACACAACTGAAGGCAAGAAAGTATGCACCTATTACAGACTGGATTCAATTCCTGTTGTCCTTATTATTGATCCCATCACTGGCCAAAAGATGCACTCCTGGTGCGGAATGGTTCAACCTGAAAGCTTGTTAGAGGGTCTGCTAGCTTTCCTTGATGCCGGTCCTAAGGATCATCACACTACCTTGTCTCACAAGCGTCCTAGAGCAGGTTCTAGCCCACCAAAAACTAAAGCAATTGTAGATTCAGATGGGAGTAAAGAGGAGGATGAGGAAGTTCAAAGAGCCCTAGCAGCTTCATTGGAATGCATGAAAGAATCAAGTGCAATTGCTGGAGGAGATAATAAAGATGCAGCAGATGTTGCTGTCAACCCGCCAGAAGCAGCCTTGCCAAAGAGGCCCACATATCCAACCTTGCCTGAAGAACCCAAGGCTGAAAAAAATCTCTTATGCAGAGTTGGTGTACGATTTCCAGATGGACGCCGTGTTCAGCGTAATTTCTTACGCTCCGATTCAATTCAGCTGCTGTGGTCATTCATTGCTGTTCAGCTAGGTGAAGATGAAACAAGAGCATTTAGATTAACTCATGCAATTCCTGGGGCATCTAAAAATCTGGACTATGAAAGTAATTCAACCTTTGAGGAATCAGGCCTTGCCAACTCTATGATTTCAGTGACTTGGGACTGA

Protein:

Promoter(3k):

>AM01G017680.1
GAATAAAAATTAATAGTTAATCTTTTAAATCATCTTATTATAACGTCATATTTTAAAGTATTTTATTCTTCTGCTACTATTTAAATTCTTTTTTTGACAAGAGCTACTATTTAAATTTTAAAATCCCTTAATTTGAACACTTTCCTTAATATTAATATTAAATATTTGGTTTAAATATGTTTTTCGTCTATGCAAATATAGCTGTTTTTTAAATAAGTCCCTGTAATTTTTTTTTAAAATAAGTCCCTGCAAATTTTGTTTGTTTTAAATATACCCTTCAGTTAACCACCTGCTGATGTTGCTAACAGATTTACCTATTGGCATTTTTGGGTAAACCCAGGTATCCACTGCACGGACAACAGTGACTAATCCCTCGCTCATTGTAGGTGCCTCGAGGGGCAGGACAGCTGGCCCAGAGTTTTAACGCTGCTTCGTACCCAAGATGGGGATCGAACCCCCGACCCTTGGTTAAGGGAGGTTCATCCCCAACCGCTAAACCCCCGACCCTTGCTAACAGATTTACCTGTTGCCATTTACATGTCATTGTTTTTATTTTTTTTCCTTTTAATATGCTGACTTGGATTAATTGTTAAAAAAATATCAATCCTCAAATTAAGTTAGGGTTCTTTCCTCTTCCTCTCCCACTCTTCCAACACCCACCATTGTCAACCCTTATTTACAACCGGCCGTCCTTTGCCTACAATGGAGGAACAGAGAGAAAGCGAGATATGGAGATGAGGGAAACGTGATTCGCGAAAGGGATGTGGAGGAACTGAGAGAGAGGTGGTGCGATGGGGGTGAGGGTGAACGGAGAGAGGTGGTGCGATGGGGGTGAGGGTGGACTGAGAGAGAGAGATTGGAGATGAGAGAGCTCAGAGAGAGAAAGAGAGGAAGAACAAACCAGATGGGGAGGAATAGTGCTTCTGGGGACGTAATACTACCCATAATAAGTACTAATCAAATAAAAGGAGGATAAGTTCTTTAAAACAAGAAATAGCACGAAAAATCGGCTATATTCATATATCAACCATTCAGATAATGATTAAAAGTACCTTCTTAGAAGGGATAGACTCGCCTCTAAGAATTGAATTAAGAGACGATATAATTATGAATCAAAGTGACTGTATAATTGCTACTAGTCGTCCCTTCTTGTAATCTTCACGGAGTTTGTATCTCCAAAAACCTGTTAAATATTTTGAGTCAGTTCGAAGCTCGAACCTTGTAGGTAAGAGCTCTATTTTCCATTTTTCAAGAACTCTTAGACACGCAAGTGTTTCGAGTTCAGCAATGGAGTAATTTTGTTCGGTTTTAGTAAATGTACCAGAGGTATATTTACATAAGATGGAATCAAAATTATTTGTCCTCAAATCTTTCGAATCGGTAGATATTTCTACAGATTTATCTGTATTCCCCAGAAAAAAAGTGTCAACGCTGGGTAGGAGTGGCTTTGGTCCATTATGCTACTATAGGGGGAGCACCCTGCCTGCCCATGCCCCAGGCGCATGGCAGGGCGCCATGGGCTCCTTCCTCGTGCCACACCCAAGCCTTTTTTGGCTTGTGTTGCATGTTTTTCATGGCAAATGTGGGAATTTCGTGGAGTTATGTTTTTAAAAAAAACCGTAATTCCTTGGGGACATCATGTCTTGCCTTGTCTAGTACCTACGCCACATGAGTAACAAGTTCTGGGTTGTCCCTAGGTAACTCGTGTCCATTCCTTGCCCAGGAACGTTGGTTGTGGGACAAATTTGCCAGACATGGCAAGACGTGATGTGGTTGGCTTTCGATGTCCCTATGAGGGCACTTGGGTGCTGGGTGCATTGGTGTCATGTGTCTGGGCGCCTTCACCCCCTTGGCGCAGGTGCCTTGGGGACATCATACTGAGAGAGGTGGTGCGATGGGGGTGAGGGTGGACTGAGAGAGAGAGAGAGATCGAAGATGAGAGAGAGATCGGAGATGAGAGAGCTCAGAGAGAGAAAGAGAATAAGAACAAACCAGATGGAGAGGAATAGAGAGAGAGGTGCTGCGATGGGGGGAGGGTGGACTGAGAGAGAGAGAGATCAGAAATGAGAGGGATTTTCTACGTTTTGGGTGTTCTAGAATATGATAACTCATCATTAAACTAATTGTATATTGAGTTCTTCCCGTACATACTGTAAGCGCAAATAGACTCATAAATATCAGAGTAAAATTCGATTGATTGGAAGATGAAAAATACGAGTTATACCGCACAAGCCTTCTAAATCATCAAATGGTGATTCTAATGGTGATGGAGGGTTTGTCAATGGTGTTTCATCATTGAACTCATCTCCTGGGATTAGTTCCAATGTTAACTTGAAATCCACCTCAAAATCTTCTAGTTTGTATCCTAGGAATGGGAGTTTTGCACCGTCCTCTTCAAGTTCAAATAAAACTAATCAAGTTAAGAAATCTGCTCCTGTAATTGCATCCCAAGTTGGCTCTATAATGGCTTGAGGAGTTTACGAGGCTGTCTTCACACACACAGTAGGAGAAGATGAGGAATACTAAAAAATAATGAAAAACAAAAATAATGACTTGGTATCCAAATAAGCCCATTTAAAAGAAATAGAAATAAATATTAATGACACATAGGAACATTATTAGTCAACTCAGACTTTTTTGTAATGTAACATTAACGGAAGGACTTTTTTGAAAAAAGTGTTTTTGCAGAGACTTATTTAAAAAACAACTATATTTGCAGCGTCAAAAAAACATATTTAAACCTAAATATTTTGATTATTTTATGAAATTAACAAAAATAACCTAGGATTCAGAGTACAGAGGTTAGAGCTAGAGTGATCAATCCAGTGGCACCAAGGTTATCTGGGAGAAGGTAATTATATAGAGGACTGAACATTAACTAATTTTGCGTGCGTCTTACTAGTTCGTTAATGACTCTCTTTCTTCTCTCCCATTCACTTCCTTTCAGCATCGGAACCCTAATTCCTAATCACAGAGAGATCATACAACAAATCCGATTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13899.9	Thioredoxin_7	180	260	5.90E-14
PF14555.9	UBA_4	12	49	2.20E-09
PF00789.23	UBX	385	451	1.70E-08

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0120114	Sm-like protein family complex	Cellular Component
GO:1990904	ribonucleoprotein complex	Cellular Component
GO:0000398	mRNA splicing, via spliceosome	Biological Process

InterPro

InterPro term	Description
IPR017346	UBX domain-containing protein 2/7
IPR001012	UBX domain
IPR029071	Ubiquitin-like domain superfamily
IPR006577	UAS
IPR036249	Thioredoxin-like superfamily

trEMBL

trEMBL term	Description
A0A1S2YTE1	_

SwissProt

SwissProt term	Description
PUX7_ARATH	Plant UBX domain-containing protein 7

KEGG

KO	Description	Enzyme
K24350	UBX domain-containing protein 7

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G14570	UBX domain-containing protein
Medicago sativa L.	MsG0480018451.01.T01	_
Oryza sativa L.	LOC_Os04g57520.1	UBX domain-containing protein, putative, expressed
Cucumis sativus L.	Csa008286	_
Glycyrrhiza uralensis Fisch.	Glyur000062s00005499.1	_
Codonopsis lanceolata	Cl_chr01_32700T	_
Arachis hypogaea L.	AH01G08110.2	Plant UBX domain-containing protein 7 like

Expression pattern