Gene detail

Detail information of Am01G017490.1 Annotation

Gene ID	Annotation
Am01G017490.1	Calcium-binding EF-hand family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G017490.1	mRNA	Chr01	114073802	114074287	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G017490.1
TAAATTATTTTACAAATCTGTGTGTTTTTTTTACATTATTTAATTAGTTAGCAATTTTTGAAAATGTGTTTCATTTTACAGAGTAAAAAGGCAGGAGGCCCTATCACTGCTCCTGAGCTGCATAGAGCCACCCATGTGAGGAAAGACACTGGAGAGTATGTTGATGAGCGCTCCAAGATGACTCAGGTAAATATACAAATTGATTTTTATTATATAATGTTGCTTTGTCAGAATGGAGCGCTAATTTGTGGTTATTCAAAACAGGAGCAAGTAAATGAGTTCATGACTCAGCTAACTCAGGGGAGCTGGGACCCTGAATCACATGGCAAACTTACTCCTGAGATGATAGATCTGGCAAACCAACATTGGGAGAAGACAGTTGGTTGGTCTAAGGGTCGCCTGTATGGTACGGGGCCCTTGGCTCCATGTATGGGCCAGTCTGGGGCCGGGAGCAGCAGAAGACGCAGTCGACCAGCTTCTACTCCTGCAGATACAAAGCATATGAGGCAGATGGAGCAGGAGCTACAGTCTACTCGACAGGAGCTGCATTCTACTCGACAGGAGCTGCACGATACTCGACAGGAGGTCAGGACCTCTTCTGAGGCGATGAAAAAGATGCAGCAAAACTTTGAGAAGGTGAGCCGTAGGCAGGCGATGATGTTAAAGTACTTTAAGAATATGCAGCAAAATCAGCAGCAAGATGAGGAGGAAGATGATGAGCAAGATGAGGAGGAAGATGATGAGCAAGGTGAGGAGCAAGCTGAGGAGTCTGATGCTGGCAGCTTTTAGTGTTGTTGATTAACGTTTTTGTTATAACATTTCATATTAAGTGTTGTGGATTCAAATTTTATGTTATAGAAGAATTTTATTCTCGTAATTTTTATTTATTGAAGAATTTTAATTTTAAACTGTTTTATGTATTTTAGATTTTATTATTTATTAATAAAATAAACAGGTATAAAAGCAGATTAATCAAAAAAATACAATCAGATGGGCATTAGCGAGGGAATTAGGGAGGGAAATTGGACGCGTGGCTAGGCATTAGCGAGAGAATTAGCGAGGGAAATTGGACGCGTGGCTAGGCATTAGCGAGGAAAAGTGGACGCGTGGCTGTCAGAATTTCCCCACGTGGCTGCCATTAGCGAGGGAATGGTCTGTCGCTAATTAGCGACGGACTCAGATTCCCTCGCTAATCTCATTAGCGAGGAGCAATTTAGTGACGCAACAGGTCCCTCGCTAATTCCCTCGCTAACGGGAATTAGCGACGGATTTTGGTCATTTTGCGAGGGAAATTTCCGTCGCTAATAACCAATTTTTTTGTAGTGAGTGGCTTGCCCTGCCCCGCCATGAATTCGCCAAAATTGTAATGGGCTAGCTGGCCCGTTAATGAATAGTACGTTGAGAAGTTGAGTCAGCTTACCGCTACGGGTTGGGGGTTTGTCCGACCATAACATAGATAAGTATAAAAATAATCGAAAGGGGAATTTGGACTAAAAAAATGGTGGGTAAGCCCGCCTAAACCCGCTCGAACAAGCCAAAAAGGTGGGTTGTCCCGCCACAACCTACCAAAAATAAAAAATGGTTTAAAATAAGGAAAACATTATCTAAAAAATATATAGACTCAATGGGGTAATGGGATAGGCGAATTGGGTTATACGGAGTGGCGGGCTATCTTGCTACTCATAGTTTCCCATGAAGACAATGTGACTTCACACGCCCAAGGTTACCACCTTGTTGATGTGTTTGTAATTTAGATGATCTTGAGTTCATGATCTAGAGTTGATGGCCAACATTTTGCTACAATCCCAAGGATTTAATTATTCCTTTGAAATTGTAATATGATTACAAAATCACAATACCCTAAACCCTTAAAAAAAATTAGCCTTCCCCTTTCGAGCACGACATCATCCTACCTCTAGTGCATCACCGTTTGTTAGTTATATTTTACCAACCCTTATCGTTTATGATAAACCTCCAATTCAAGCCTAGTCCTACAGCGTCTCACGTTGTTAGTCTCTTCGTTGATAGTTGCTAAGTTTATCTTTATCAACTCCTTTGTAAAAGAAATAGGGTTAAATTAATGTGTTTTTAGTATTTATAAAATACGCGGTTTTCTTTTTTACTCATTAATATTTTTTTCTTCAACTTTTTTCCTCAATTATATCTTTGTTTACACTTTTTGTCTGTGACGTGAGATGGCGCTCACCTACCTCAATTATATTTTATTTTTAGTCTAATTTTTATTTAAATTCTAATATTTATTTATTAAAAAGTGTGATGTGGTAGGTGATTGGGCATCTTTGTCGTTTAAATGCATGACGTGGAAAGAGTTTGTGTGACGGTACGTATTAGTAGTGTATCAAAAAAGCGAATAGAGGTATAATATAGAATCAAAAATTGAATAAATATTTACTGATGATTAAAAATAAACAACTCATATTAATAGGGACTAAAAATACATTGAAAAAAACACACACACACACCTGCAGAACATGCAGATCAGCTAAATTTAGGTAAATCTCAATAAGGAGAATGGATAATTAACCATTTGTCCAAATTTTACCTAAATATAGTTCATTCCACACACAAGGGATGATGTTCCCAACAAAATTGTTAAGCAAGAGCCAAGATAAAAGTTACCCATCCTTGATATACGTTAAGATTAAGAATTTATCCGTTATCATATGCTCATTTACTCAAATTCAGTTTTACTTTGCCTTTTAACCAACTACACGCGTTTTCTACTTTTCTCTCCATCCCTTTTTGAACCATTCCAATTTCCAAGCGTACATGATAGATATATCATTGTCACAACACACCAAAATACACCAAATCAAACCATACCCTACATTCTCTCCATCACCAAAAGAAATTAACAAACAAAACACCCCACCATTCATAACCATAACCAAAACAAAAAACAAAATCCTCAATATAGATAGATCTATCAATCTATTCCTCAAGGCATATTGGCCTTCACAAGCCTAGCTAGCTTCAACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00036.35	EF-hand_1	88	114	3.00E-30
PF00036.35	EF-hand_1	123	150	3.00E-30
PF13499.9	EF-hand_7	11	73	3.60E-28
PF13499.9	EF-hand_7	86	147	3.60E-28
PF13833.9	EF-hand_8	103	147	3.30E-23

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005509	calcium ion binding	Molecular Function
GO:0032588	trans-Golgi network membrane	Cellular Component
GO:0030234	enzyme regulator activity	Molecular Function
GO:0032440	2-alkenal reductase [NAD(P)+] activity	Molecular Function

InterPro

InterPro term	Description
IPR011992	EF-hand domain pair
IPR002048	EF-hand domain
IPR018247	EF-Hand 1, calcium-binding site

trEMBL

trEMBL term	Description
A0A396GQ62	_

SwissProt

SwissProt term	Description
CML16_ARATH	Probable calcium-binding protein CML16

KEGG

KO	Description	Enzyme
K13448	calcium-binding protein CML

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G25600	Calcium-binding EF-hand family protein
Medicago sativa L.	MsG0880045336.01.T01	_
Oryza sativa L.	LOC_Os05g50180.1	OsCML14 - Calmodulin-related calcium sensor protein, expressed
Cucumis sativus L.	Csa000993	_
Glycyrrhiza uralensis Fisch.	Glyur000239s00017874.1	_
Codonopsis lanceolata	Cl_C00377_unscaffolded_00130T	_
Arachis hypogaea L.	AH15G19030.1	Probable calcium-binding protein CML16 like

Expression pattern