| Gene ID | Annotation |
|---|---|
| Am01G017420.1 | magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G017420.1 | mRNA | Chr01 | 113776087 | 113828577 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF02776.21 | TPP_enzyme_N | 353 | 517 | 1.00E-28 |
| PF16582.8 | TPP_enzyme_M_2 | 530 | 763 | 3.00E-22 |
| PF13378.9 | MR_MLE_C | 1144 | 1315 | 6.10E-22 |
| PF12697.10 | Abhydrolase_6 | 1424 | 1679 | 4.10E-20 |
| PF00561.23 | Abhydrolase_1 | 1422 | 1674 | 4.60E-20 |
| PF12146.11 | Hydrolase_4 | 1421 | 1635 | 7.50E-10 |
| PF02775.24 | TPP_enzyme_C | 815 | 922 | 9.90E-08 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0009063 | amino acid catabolic process | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0042550 | photosystem I stabilization | Biological Process |
| GO:0042372 | phylloquinone biosynthetic process | Biological Process |
| GO:0043748 | O-succinylbenzoate synthase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011766 | Thiamine pyrophosphate enzyme, TPP-binding |
| IPR012001 | Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR032264 | Menaquinone biosynthesis protein MenD, middle domain |
| IPR013342 | Mandelate racemase/muconate lactonizing enzyme, C-terminal |
| IPR018110 | Mandelate racemase/muconate lactonizing enzyme, conserved site |
| IPR029017 | Enolase-like, N-terminal |
| IPR036849 | Enolase-like, C-terminal domain superfamily |
| IPR029065 | Enolase C-terminal domain-like |
| IPR029035 | DHS-like NAD/FAD-binding domain superfamily |
| IPR000073 | Alpha/beta hydrolase fold-1 |
| IPR029058 | Alpha/Beta hydrolase fold |
| IPR004433 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
| trEMBL term | Description |
|---|---|
| A0A072U318 | _ |
| SwissProt term | Description |
|---|---|
| PHYLO_ARATH | Protein PHYLLO, chloroplastic |
| KO | Description | Enzyme |
|---|---|---|
| K14759 | isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase | [EC: 5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113] |
| K02551 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase | [EC: 5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G68890 | magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases |
| Medicago sativa L. | MsG0880045328.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g37090.1 | hydrolase, alpha/beta fold family domain containing protein, expressed |
| Cucumis sativus L. | Csa005172 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000239s00017890.1 | _ |
| Codonopsis lanceolata | Cl_chr01_17500T | _ |
| Arachis hypogaea L. | AH01G07820.1 | Protein PHYLLO, chloroplastic like |