Detail information of Am01G017390.1 Annotation
Gene IDAnnotation
Am01G017390.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G017390.1mRNAChr01113632472113638635-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF01985.24CRS1_YhbY2052842.00E-32
PF01985.24CRS1_YhbY3194022.00E-32
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0006397mRNA processingBiological Process
GO:0003899DNA-directed 5'-3' RNA polymerase activityMolecular Function
GO:0008270zinc ion bindingMolecular Function
GO:0003677DNA bindingMolecular Function
GO:0006351DNA-templated transcriptionBiological Process

InterPro
InterPro termDescription
IPR035920YhbY-like superfamily
IPR001890RNA-binding, CRM domain
IPR044599CRS2-associated factor, plant

trEMBL
trEMBL termDescription
A0A1S2YTH8 _

SwissProt
SwissProt termDescription
CAF2P_ARATHCRS2-associated factor 2, chloroplastic

KEGG
KODescriptionEnzyme
K27710CRS2-associated factor 2, chloroplastic

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G23400 RNA-binding CRS1 / YhbY (CRM) domain-containing protein
Medicago sativa L.MsG0480023818.01.T01 _
Oryza sativa L.LOC_Os01g21990.1CRS2-associated factor 2, chloroplast precursor, putative, expressed
Cucumis sativus L.Csa006573 _
Glycyrrhiza uralensis Fisch.Glyur000239s00017892.1 _
Codonopsis lanceolataCl_chr01_13360T _
Arachis hypogaea L.AH03G40390.2CRS2-associated factor 2, chloroplastic like

Expression pattern