Detail information of Am01G016490.1 Annotation
Gene IDAnnotation
Am01G016490.1 ubiquitin-specific protease 23
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G016490.1mRNAChr01107716758107719412-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00443.32UCH923934.10E-54
PF13423.9UCH_1913754.30E-17
Gene family
Gene familySubfamily
Ubiquitin FamilyUSP

Gene Ontology
GO termDescriptionCategory
GO:0004843cysteine-type deubiquitinase activityMolecular Function
GO:0016579protein deubiquitinationBiological Process
GO:0005829cytosolCellular Component
GO:0005634nucleusCellular Component
GO:0006508proteolysisBiological Process

InterPro
InterPro termDescription
IPR018200Ubiquitin specific protease, conserved site
IPR028889Ubiquitin specific protease domain
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765Papain-like cysteine peptidase superfamily

trEMBL
trEMBL termDescription
A0A8B8JDI0 _

SwissProt
SwissProt termDescription
UBP23_ARATHUbiquitin carboxyl-terminal hydrolase 23

KEGG
KODescriptionEnzyme
K11855ubiquitin carboxyl-terminal hydrolase 36/42[EC: 3.4.19.12]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G57990 ubiquitin-specific protease 23
Medicago sativa L.MsG0880047598.01.T01 _
Oryza sativa L.LOC_Os06g08530.2ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed
Cucumis sativus L.Csa013834 _
Glycyrrhiza uralensis Fisch.Glyur000063s00005895.1 _
Codonopsis lanceolataCl_chr07_06510T _
Arachis hypogaea L.AH01G23900.1Ubiquitin carboxyl-terminal hydrolase 23 like

Expression pattern