Gene detail

Detail information of Am01G016320.1 Annotation

Gene ID	Annotation
Am01G016320.1	P-glycoprotein 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G016320.1	mRNA	Chr01	106264834	106284116	-

Sequences

CDS:

>Am01G016320.1
ATGGCTTTGGAGGGGAATGAGAAGAAGGAAGAAAAAAAGGGTAGAAAGGTTCCATTTCTAAAGCTCTTTTCTTTTGCTGACTTCTATGATTATGTCTTGATGAGTGTTGGAACTGTTGGGGCATGTGTTCATGGTGCCTCTGTTCCTGTTTTCTTTATCTACTTTGGAAAGATTATCAATGTCAGTGGCTTGGCTTACCTCTTTCCCAAAGAAGCTTCTCATCAAGTTGGCCAGTATTCGTTGGATTTTGTGTATCTAGGTATAGCAATTTTGTTTTCCTCTTGGGCAGAGGTGGCTTGTTGGATGCATACGGGTGAACGTCAAGCAGCAAAGATGAGGATGGGGTATTTGAGGTCAATGTTGAGCCAAGATATAAGTCTTTTTGATACCGAGGCATCAACTGGACAAGTTATTTCTTCTATTACAAGTGACATCATCGTTGTACAAGATGCGTTGTCTGAGAAGGTAGGGAACTTCATACACTACATAAGCCAATTTATAGCGGGCTTTATAATTGGTTTTGTGAGAGCATGGCAAATCAGTTTAGTTACACTTGCCATTGTACCTTTCATTGCTCTTGCTGGAGGTCTTTCTGCATACGTCACAATTGGGCTTATTGCAAATGTTCGGAAATCATATGTGAGAGCTGGTGAAATCGCTCAAGAGGTGATAGGCAATGTCAGAACCATACAAGCATTTTCAAGAGAGGAAAGAGCAGTGAGATTGTACAAAGAGGCTTTAATGAACACATACAAGAATGGTAGAAAAGCAGGTTTAGCAAAGGGTCTTGGATTAGGTTTTATGCATTGTGTCCTTTTTCTATCATGGGCTCTGCTTGTTTGGTTTACAAGCATTATTGTTCACAAGAAAATCACCAATGGTGGAGAGGCTTTCGCTACCATGCTCAATGTCGTGATCTCTGGCTTGTCACTTGGGTATGCAGCACCAGATATTTCTGCCTTTATAAGAGCAAAAGCAGCAGCTTATCCCATCTTTGAGATGATAGAGAGAGATACAATTGCCAAAAACAGCTCAAAAACTGGTCAAAAATTAAGTGAAATAAAGGGAAACATCCAATTTGTGGATGTTTGTTTCAGTTACCCTTCTCGTCCCGATGTTACTATCTTCAACAATTTTTGTCTTGAGATTCCTTCAGGGAAAATCTTGGCCCTTGTGGGAGGAAGTGGTTCTGGGAAAAGCACAGTCATATCATTGATTGAGCGTTTTTATGAACCACTTTCTGGTCAAATTCTATTCGATGGAAACGATATAAGGGAGCTTGATCTCAAATGGCTTAGACAGAAAATTGGGTTAGTTAATCAAGAGCCAGCACTTTTTGCTACAAGCATTAGGGATAATATATTGTATGGTAAACGTGATGCCACTCTTGAAGAACTAAATTGTGCTTTGGAGCTTTCTGATGCTCGGTCTTTCATCAACAATCTTCCGAATGGATTAGATACTCTGGTAGGTGAGAGAGGGATACAATTATCAGGTGGACAAAAGCAAAGGATAGCAATATCTCGTGCTATAGTTAAGAATCCATCAATCCTTTTATTAGATGAAGCAACTAGTGCTTTGGATGCAGAGTCCGAGAAGAGTGTACAACAGGCTCTTGATCGTGTCATGGTTGGTAGAACAACTGTGATAGTGGCACACAGACTTTCTACCATTAGGAATGCAGATATGATCACTGTTATTCAGGGAGGGAGTGTAGCTGAAACTGGTAGCCATGAAGAGCTCATTTCCAACCCAAGTAGTATATATGCATCACTTGTTCAAGGACACCCTTCTAAAGATCTTTGTTTGAGAAGGTCATCAAGCATAAAACACTCAAGAGAGTTATCCCATACAACAACCATTGGCAGTAGTTTTCATAGTTTTCGTTCAGATAAAGAATCTACTGGCATTTCTTGTGCTGATGACGCTGGAAGTGTTGGAAAGTCAAGGCATGTCTCAGCGAAAAGGCTTTATTCCATGATTCGTCCCGATTGGTTTTATGGGGTGCTTGGGACCTTAGCTGCTTTTATTACTGGAGCACTTATGCCACTTTTTGCTCTTGGAATCTCTCATTCTCTTGTATCAAATTACATGGATTGGAATACAACACGTCATGAAGTGAAAAAAATTGCTTTCCTTTTCTGTGGGGCAGCAATTGTAGCTATCACTGCCTATGCCGTTGAACATCTTTCTTTTGGAATCATGGGCGAGCGACTTACCCTTCGTGTCAGAGAAATAATGTTTTCTGCTATTATGAAGAATGAAATTGGTTGGTTTGATGATACAAGCAACACAAGTTCTATGCTTTCATCACGTTTAGAAACTGATGCAACTTTCTTAAAAACTATAGTGGTGGATCGTTCTACAGTTCTCTTACAGAATATTGGCCTAGTTGTTACTTCATTTATCATTGCCTTCATATTAAACTGGAGGATAACCCTTATAGTCTTGGCCACATATCCTTTGATAGTTAGTGGTCACATTGGCGAGAAACTTTTCATGCAAGGCTTTGGTGGAAACCTAAGCAAAGCATATCTAAAAGCAAACATGTTAGCTGGGGAGGCTGTGAGTAATATAAGGACTGTAGCTGCATTTTGTGCTGAAGAAAAGGTCCTTGACCTTTATGCTGATGAGCTTGTTGTACCTTCCAAGCGTTCATTCAATCGAGGCCAAATTGCTGGCATATTCTATGGAATTTCCCAGTTCTTTATTTTTTCATCCTATGGCCTTGCCTTATGGTATGGATCTGTCTTGATGCAAAAGGAACTTGCTAGCTTCAAATCAATCATAAAGTCATTTATGGTTTTAATTGTAACAGCACTAGCTATGGGGGAGACTTTAACACTGGCACCAGACCTTTTGAAAGGGAATCAAATGGTTGCATCAATTTTTGAAGTTATGGATAGAAAGACAGAAATAAAGCATGATGTTGGAGAAGAGTTGAAGACAGTGGAAGGAAAAATTGAGTTAAGAAGAATCCATTTTAGCTACCCTTCTAGGCCAGACATCGTTATTTTTAATGATTTTAATCTAAGAGTGCCTTCAGGAAAGAGTATTGCCTTGGTGGGACCCAGTGGTTCTGGTAAAAGCTCAGTTATCTCCCTTATACTTAGATTTTATGATCCAACATCTGGAAAGGTGATGATTGATGGAAAAGACATCAAGAGAATAAATTTGAAATCTCTTAGGAGACACATTGGTCTTGTGCAACAAGAGCCAACTCTTTTTGCAACAACAATTTATGAAAATATTCTTTATGGTAAAGAAGGAGCCTCAGAATCAGAAGTGATTGAAGCAGCAAAACTTGCCAATGCTCATAATTTCATTAGTGCTCTTCCTGAAGGCTACTTCACAAAAGCAGGTGAGAGAGGAGTTCAACTATCTGGTGGCCAAAAACAAAGGGTGGTCATTGCAAGGGCCATTTTAAGAAACCCCAAAATCTTGCTTCTAGATGAAGCCACTAGTGCATTGGATGTAGAATCAGAAGGTGTGGTGCAACAAGCTATAGACAAATTAATGCAGAATAGAACAACTGTTATAGTGGCACATAGGCTATCCACAATAAGAAATGCAGGTCAAATATCAGTTTTACAGGATGGAAAAATAATTGAGCGAGGCACTCATTCAAGTCTTTTAGAGAATACAGATGGAGCTTATTACAAATTAGTCACCCTACAGCAACAACAACATGCTCAAGAACATGGCCAATGA

Protein:

>Am01G016320.1
MALEGNEKKEEKKGRKVPFLKLFSFADFYDYVLMSVGTVGACVHGASVPVFFIYFGKIINVSGLAYLFPKEASHQVGQYSLDFVYLGIAILFSSWAEVACWMHTGERQAAKMRMGYLRSMLSQDISLFDTEASTGQVISSITSDIIVVQDALSEKVGNFIHYISQFIAGFIIGFVRAWQISLVTLAIVPFIALAGGLSAYVTIGLIANVRKSYVRAGEIAQEVIGNVRTIQAFSREERAVRLYKEALMNTYKNGRKAGLAKGLGLGFMHCVLFLSWALLVWFTSIIVHKKITNGGEAFATMLNVVISGLSLGYAAPDISAFIRAKAAAYPIFEMIERDTIAKNSSKTGQKLSEIKGNIQFVDVCFSYPSRPDVTIFNNFCLEIPSGKILALVGGSGSGKSTVISLIERFYEPLSGQILFDGNDIRELDLKWLRQKIGLVNQEPALFATSIRDNILYGKRDATLEELNCALELSDARSFINNLPNGLDTLVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQQALDRVMVGRTTVIVAHRLSTIRNADMITVIQGGSVAETGSHEELISNPSSIYASLVQGHPSKDLCLRRSSSIKHSRELSHTTTIGSSFHSFRSDKESTGISCADDAGSVGKSRHVSAKRLYSMIRPDWFYGVLGTLAAFITGALMPLFALGISHSLVSNYMDWNTTRHEVKKIAFLFCGAAIVAITAYAVEHLSFGIMGERLTLRVREIMFSAIMKNEIGWFDDTSNTSSMLSSRLETDATFLKTIVVDRSTVLLQNIGLVVTSFIIAFILNWRITLIVLATYPLIVSGHIGEKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEEKVLDLYADELVVPSKRSFNRGQIAGIFYGISQFFIFSSYGLALWYGSVLMQKELASFKSIIKSFMVLIVTALAMGETLTLAPDLLKGNQMVASIFEVMDRKTEIKHDVGEELKTVEGKIELRRIHFSYPSRPDIVIFNDFNLRVPSGKSIALVGPSGSGKSSVISLILRFYDPTSGKVMIDGKDIKRINLKSLRRHIGLVQQEPTLFATTIYENILYGKEGASESEVIEAAKLANAHNFISALPEGYFTKAGERGVQLSGGQKQRVVIARAILRNPKILLLDEATSALDVESEGVVQQAIDKLMQNRTTVIVAHRLSTIRNAGQISVLQDGKIIERGTHSSLLENTDGAYYKLVTLQQQQHAQEHGQ*

Promoter(3k):

>AM01G016320.1
ATGTCTCGCTCCTCCTCTAAAGCTGAGTATCTTGCCTAAGCTTCAACAGTTTATGAATTCCAAGTGCAATGGCTTACATAACTTTTAAATGACCTCAAAGTTTCGTATATATTTCCAGCTCTCCTTTACTGTGTTAGTCAGTCAGCTCACCACATTGCTTCCAATAATCCTTCGTTTCACAACCGCACTAAACATATTGAGTTGGATTGTCATCTCGTTTGGGAGAAAGTCTTGGCCAGACTTTTCCATCTTCTTCCTATTTTCAGCACCAACCAGCTTGCAAATATCTTCACAAAACCATTGGATACAACATCCTTCAAGTCTCTTTTGTGCAAACTCGGCGTGCATAACATACATTGCCTAATTTGAAGGGGGCTATTAAGATCTATTCTGTTATTAAAACCTCTTTATTGGATCTGTTATTTCGTTTCAAATTATTGTTCTTACTTTTTAATTGTGGCGGATCTAATATGGACCTCTAAAAAAAGGTCCACCGGTGGACCGTCACTATTTTTAGTAAAAAATGAATTTTATAATAATAAAATTGAAAAATAAAAATAATATTTTATTAAAAATTACCAAAAATGATAAAGGTCCACCGGCAGACCATTTTTTAGGGGTCTATATTAGATGCACCATTTAATTGAATTCTGCTTTTATTTGTTAAAGGACTTTGCTTTATAAGCAAGCTCATGTACAATCATTATTTTCAATTAATCAATTTCATCATAATAGTACTTGCGGTCGGGAAAATTGATTTGAAATTATCTTCATTACAAAAGACTAAACGCTATTTATATGGAATACAAAGACTCAACCCTAAATAAATAAATCAAGAAACAAATAATACTAATAATTACAAAGGTAAAATATGTTTTTGGTTTCTACAATATTGGGAGCTTCTATGTTTAGTCACTACATTATGGAAATAGGCGTTATCGTCCCCAACTTATTTTTCCGTTTTCATTATTAGTCTCTGGCGTTAATTCAAGCTAACTGGCCTAACGTTTTTCTGAGGTGTCATGTACAAGTGGCTTTTTTTATCCATGTGGCTTTCTTTTTTACTTTATTCTATTTTATTAAGTTTTTGTTTTTTAAAAAAAAAAAGTTCCTTCCCCTAATTTCCCAAAACAGATCAGATTCATTCCCCTTCACCTCTCATCCACAACAGTACCAAATCCTAAAGTCCTCAAATGAAAAAACTCACCTCACAATTGAGTAAAGCAAATCACAGTCCATATGTCTCTCCCCATCTCAATTTCTTTGTACCGCAAAGCAATCGAGAGAGCTCTTCCTCTTCTCCTTCGATTTGCGATCTCAAGATCACATCGAGACCTCCCTCCACCACCGACCAAGGAGAGATATAGAAACTCAACCACCGATTATATCTGTTAAGCAAAAACAGAGCCTCCAAGAAGCGAACAAAACTAGAACTCACCTCACTATAGAAGACCCACGTTTTAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTATCATCTATCCCTACATTCTCCATGGCTAAATCTAGCTGATTTCGATCACCATTCAAACGCCCATGACCACCACACAATTTCTCCCTCTTCCTCCTCTCTATGTATGGTGACTGTTTCGTAAATAAAAAAACGGATCTGAGAGTCTCAAACCGCCGCCACCTTCTTCCTTATTTTCCAGCAACCATGGATCTTCTATCGAAAAATGAGTTTGATATTCAGAATCCTCACGTCATCCTTTTGCAAAGCCCTCAAATTTTTTTGTCATCGGAGTACCCTCCACCGGCAACCACCGTACCGAAGGTTATCTCCGCCGATTCTGCTACCGGAGGAGGAAGAAGAAGATCAGTTTTTTCGAACAAAAAAATAAAAATTAATAAAAGAGAAAATTTTGGTAAAAATAAATAAGAAAAGCCACATGGGTGACAAAAAAGGTGAATGTATTTGACACGTAGATTAAAAAAATACACGTGTAAAAGCCAACTCAATTTTTGTTAGTCCAGTCAGCATGATTTAACACCAGAGATTAATAATGTAAACGGTAAAATAAGATAGGGACCAAAATGCCTATTTCATTAATGTAGGACTAAACTTAGAAGGACCCAATTTTATAAAACAAAAAAACATATTTTACCCTAATTACAATTAAAGTAGATCAAATCAATACCTGATTGGTTGTCTAGCTTAAATTAGGAAAGCTAATAAATATAATTGTAGAGACAAATTTATTCCCGATTCACAAGGATTTATTCTTGATAAATTCTTGATTCATCAGGATTTATTCATATTCACAATTGCTACTTCGTCTGCCAACAAAAGATGAGTTAATTAACAATTTAATTCATAAACGCTTGCTCGTAGTTCTATCTCTAGGTATGATTATTTAATAAGTAGAGTTTTAGTAAATTTTCAGCAAAATAAATAGAGGGAAAAAAGACTTCTCTTTTATACGATAATAAAATACATTAGATATATATTTACTAAGAATTTCTAAGTAAAAATGCAGAAACAAACAATGAGAAACACAGGCGAATGTGTGAGTGATGCTGATATAGCAAATCATTGATATTCGATCACAAGTGTACGTGTGGTTCGATTTCCATTTACGTCCATAGTTATCTGATTCCAATAATCGATATATAATATGTATATCGATCATTTTCATGTTAAATTTTGAATTTATGACCCACCCATCCACTAACTGTCAACCCTTTGCATTCATTCATCTACTGTTTATCTTCAAGTTAGTTCCTTCAATTAATTGATATATCGTAATAAGTCCCCCATCTTTTCCTCGTGCAACGATTAATTTGTTTTTGCCACATGCAGCAATAAATTAACCTCGCATTGTGTAGTTGCAGAAATATATAAGTGCACCTTTCTTTACCTATTATCTCAGAATTATCAATAGGACAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00664.26	ABC_membrane	36	306	3.10E-92
PF00664.26	ABC_membrane	670	941	3.10E-92
PF00005.30	ABC_tran	377	525	3.40E-71
PF00005.30	ABC_tran	1007	1155	3.40E-71

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0071944	cell periphery	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR039421	Type 1 protein exporter
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR036640	ABC transporter type 1, transmembrane domain superfamily
IPR011527	ABC transporter type 1, transmembrane domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A8B8LWG2	_

SwissProt

SwissProt term	Description
AB2B_ARATH	ABC transporter B family member 2

KEGG

KO	Description	Enzyme
K05658	ATP-binding cassette, subfamily B (MDR/TAP), member 1	[EC: 7.6.2.2]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G25960	P-glycoprotein 2
Medicago sativa L.	MsG0580025502.01.T01	_
Oryza sativa L.	LOC_Os02g46680.1	multidrug resistance protein, putative, expressed
Cucumis sativus L.	Csa002154	_
Glycyrrhiza uralensis Fisch.	Glyur000341s00020139.1	_
Codonopsis lanceolata	Cl_chr02_36420T	_
Arachis hypogaea L.	AH05G39130.1	ABC transporter B family member 2 like

Expression pattern