Gene detail

Detail information of Am01G016170.1 Annotation

Gene ID	Annotation
Am01G016170.1	K-box region and MADS-box transcription factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G016170.1	mRNA	Chr01	105493699	105499498	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G016170.1
GTAAAACGTTGAAGAAGTTCTTCTCATATAGTGGTGGTTATCAAGTCCAAAGGTTGCAAAGCCGGAGGCCGAGGACGTAGGGCTTTTATCCCGAACCTCGTAAAATTCACGGTGTATCTCTTTCCCTACTTTTTTACTTTACCGTTTATATTTGCCTATTATTATATTTGACATCATTGCGCTGCGTTCAATATCTGTTTATTTGATTAGCGTAAAATATCACTGTAATTGGATCTGTCATAGGTATAGCTTGCTTAGGTACTGCATATAGTTTAAATCTTATTTTACGCATTGATTTAAACTGGCATTGTTAATATTTTAAAAATTAAAAAGAATTGAAGTTTAGCGTATAACCTTATTCACCCCCCCCCCTCTAAGGTTATCATATAGTCCAACACAGATCACCCTGCCTCAAACCTTTGTGAACCACAAATTCCTCCGTAGGACTGCCGTTTACCAAAACTAACATGGTGCTCAAAAAGATACACGCCTTCATCCACTTCTGGTCAAACCCCATACGCCCTAACATATAATCCAAGTAACTCCAAGTCACAGAGTCATAGGCCTTTTCAAAATTCAGTTTAAACAACAAACACGCATCCTTCTGACAAATAGCAAGATCAACCATTTCATTGAGCAACAGATCGCCATCTTGGATATATCTACCTGGTAGGAAAGCCGAATGACAAGGAGATATCAAACTTGGCAACACCTTTTTCAACCTAGAAGCAAGCACCTTTGCCAAAATCTTGTATAAACCCCCAATCAAGATAGGACGGTATTCCTTAAGCTGTGATGGCTTTTGGTAAAACATTAGTTTATGAAGTTCTTGGATGAACCCCCGCCACGTCTTCTTTCACTACTTCCCAGCATTCTTTGATGAAACTCAAATTGAATTTGTTCGGACCTGGGCTCTTTTTCCCATCACACCCCCAAACCTCCTCTTAAATCTCATCTTCTGAAATAGCAGAGGTAAAAAAACAATTATCTTGCCTATTGACTTGTCTCAACTCAAGAGCACTTAGAGTAGGGCGAATAAGACAATCCTCAATGAAACTATTATCGAAATAGCTCCTTACCTCCCCTTTAACCGGATCAACCTCTTCCAACATCATCCTTCTCCAGCATCAGAATCTGATTCTTCCTAGCTCTAGACTGAATGTTGGCATGAAAATACTTGGCATTAGCATCCCCTTAAAGAATCCAACGGGCTCTTGATTTCTGTTTGATGTGGCTCTCTTCCAGGTACACCTTTGTCCAAAAAAGGCTTGAGACTTCTTTTCTTTTTTCAACAACATCTAAATCCTCCACAGTTCTCTCGATATTGAGGTCCATCCACCCAAACACTTCCTTATTCCACAACTTCAGCTTTCTCACATTAATTTAAGTTTCTCCTTTACAAAGAAACCCTTTTTACCAATTATATGAAAGCTCTTCCAACTTTCCGCTACAAATGACCTAAACTCCTCCCTCTCAAACCAACAATTGTTGAAGCGAATAGGTTCGGACCTCAATTCGTTGTTGAGCTAACGAGTCATATAGGATAGTGATCTGAAATGTTATAAATGCTAGTGACGCGTGCATACGATATTTCCTTAATTACTAAACGAAGTACCCATCATGTTTGTGTATATTGACATACCCATGCAGGGAAAGTCATACATGTTGTTAGAAATAATAATTGGAAAATACGGTAGAACTTGAAAGTTGTGGAGTTTTAGAAATTGTTCAAGTTTTGGTGTAATTGGGTGTTTAATTTCTTAATTTACCACTAAGTTGTAAGTGGAGCAATAAACATTGAGTATGATACTAATTTGTGAGTAGAGCCATTTTAAGAAATAGACAATTTGTCATTCTAGCTCTAATATAAATAGAAGAACATAGTCTTATTTTTGGTATATGACAAAGTAATAAAAACCATATTATGCTTAATTTCATATATCTTCAACTACCACTAACAGATGCAAGGGTGGACTGAAATAATTTGGTAGAGATGGACAAATGACCTATTTGGGAAACAATTTTTGCAAATTATATGATAAGATGTATCTGTACACCACTTTTTAAGTAGTATACCCTAAAGGAGGCCTCCAACTACACAGATGTACATACTTAGATGTATGTATGGCTCAATATATGTATACCTCAAAAAGTACTCAAATAATGTCACTATATATATGTCCAGCCATGCCAGCCCAGGGTGTAAGGTTATCAAGTATTTTAGGACAATATTAGTGAGGGACCAAAATAATGTATTAACCTGGAATACCCATAAAAGCATTAATGGAAAGGAAAGTGAAGTAGAAAGAGATGAATAAAAATGGTAAAGGTAAAAAGTTAAACCTAAACAAAACCATTTCAATATTTGATGGAAGAAAGGATGGACCAGAGTTCAATGGCGCCGTCAGTGAAAGGTTGCACGTAATGTTCTTGTCCGTACGATATTGACACTGTTTAGACCATCAGACACTACACTTCAGTGAAGAAAAAGAGAGAGAAAAACCAAGAGTAAAAAATAAAAAAAAATAAATAAAAACTGAAAAAGCAATAGAGATATGATTGTGTGGCTGTTAGTTAACAAAGTACAACAACATGGAAACTGACCAACCAATCCCATGTAGACAACACAAACGTTATCAAAACAACTATGGTTTTTTTCAAAACAAGAAACCAGAAACCACCTTGTCTCAAAACCCCATTTTGTATTATAATAATAATAAAAAGAGTGATAGATAGATAGATAGATAGATAGAAAGAGATAATAGCACAGTCTCACACACACACTATGGTCTCTCCACACACACCTCTTCATACTTGTCCAGAAGAAGAAAGACCCATAAATTAACATTCTCTCTCAACTCGCTTTGCTATAATAGCAAGCCTTTTAAGCATATTTCTGGGGTTTGTTCCCTTTTACTTGTTTAGGTTTTTCTTGGGAAAAAAGGGAAAGAAAGGATCCAAGTTTAATAATATTTATTTATATAATTTATTAAAACTAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01486.20	K-box	84	172	2.60E-30
PF00319.21	SRF-TF	10	57	3.60E-26

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	FLCP10

Gene Ontology

GO term	Description	Category
GO:0046983	protein dimerization activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0000987	cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0010582	floral meristem determinacy	Biological Process

InterPro

InterPro term	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR002487	Transcription factor, K-box
IPR033896	MADS MEF2-like

trEMBL

trEMBL term	Description
A0A1S2YTQ6	_

SwissProt

SwissProt term	Description
AP1_VITVI	Agamous-like MADS-box protein AP1

KEGG

KO	Description	Enzyme
K09264	MADS-box transcription factor, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G69120	K-box region and MADS-box transcription factor family protein
Medicago sativa L.	MsG0880045135.01.T01	_
Oryza sativa L.	LOC_Os03g54160.2	OsMADS14 - MADS-box family gene with MIKCc type-box, expressed
Cucumis sativus L.	Csa004592	_
Glycyrrhiza uralensis Fisch.	Glyur000401s00023642.1	_
Codonopsis lanceolata	Cl_chr02_57170T	_
Arachis hypogaea L.	AH20G30090.2	Agamous-like MADS-box protein AGL8 homolog like

Expression pattern