| Gene ID | Annotation |
|---|---|
| Am01G016160.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G016160.1 | mRNA | Chr01 | 105379106 | 105380920 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01535.23 | PPR | 378 | 407 | 1.40E-62 |
| PF13041.9 | PPR_2 | 79 | 128 | 3.50E-62 |
| PF13041.9 | PPR_2 | 273 | 322 | 3.50E-62 |
| PF13041.9 | PPR_2 | 375 | 422 | 3.50E-62 |
| PF20431.1 | E_motif | 493 | 555 | 8.50E-23 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0009451 | RNA modification | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0043231 | intracellular membrane-bounded organelle | Cellular Component |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0004540 | RNA nuclease activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR046960 | Pentatricopeptide repeat-containing protein At4g14850-like, plant |
| IPR002885 | Pentatricopeptide repeat |
| IPR046848 | E motif |
| trEMBL term | Description |
|---|---|
| A0A1S2YU47 | _ |
| SwissProt term | Description |
|---|---|
| PPR21_ARATH | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G13410 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0880045133.01.T01 | _ |
| Oryza sativa L. | LOC_Os12g38880.1 | tetratricopeptide-like helical, putative, expressed |
| Cucumis sativus L. | Csa005595 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000401s00023644.1 | _ |
| Codonopsis lanceolata | Cl_chr07_08870T | _ |
| Arachis hypogaea L. | AH09G21530.2 | Pentatricopeptide repeat-containing protein At3g29230 like |