Detail information of Am01G016070.1 Annotation
Gene IDAnnotation
Am01G016070.1 male gametophyte defective 3
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G016070.1mRNAChr01104100559104111350-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00940.22RNA_pol5889793.40E-155
PF14700.9RPOL_N1324651.20E-82
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0003899DNA-directed 5'-3' RNA polymerase activityMolecular Function
GO:0034245mitochondrial DNA-directed RNA polymerase complexCellular Component
GO:0006390mitochondrial transcriptionBiological Process
GO:0003677DNA bindingMolecular Function

InterPro
InterPro termDescription
IPR002092DNA-directed RNA polymerase, phage-type
IPR037159DNA-directed RNA polymerase, N-terminal domain superfamily
IPR029262DNA-directed RNA polymerase, N-terminal
IPR024075DNA-directed RNA polymerase, helix hairpin domain superfamily
IPR046950DNA-directed RNA polymerase, C-terminal domain, phage-type
IPR043502DNA/RNA polymerase superfamily

trEMBL
trEMBL termDescription
A0A1S2YTQ2 _

SwissProt
SwissProt termDescription
RPOT2_NICSYDNA-directed RNA polymerase 2, chloroplastic/mitochondrial

KEGG
KODescriptionEnzyme
K10908DNA-directed RNA polymerase, mitochondrial[EC: 2.7.7.6]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G68990 male gametophyte defective 3
Medicago sativa L.MsG0780036705.01.T01 _
Oryza sativa L.LOC_Os09g07120.1DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed
Cucumis sativus L.Csa000978 _
Glycyrrhiza uralensis Fisch.Glyur000401s00023659.1 _
Codonopsis lanceolataCl_chr01_17600T _
Arachis hypogaea L.AH01G07750.1DNA-directed RNA polymerase 1B, mitochondrial like

Expression pattern