Detail information of Am01G016010.1 Annotation
Gene IDAnnotation
Am01G016010.1 Tetratricopeptide repeat (TPR)-like superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G016010.1mRNAChr01103573264103575255-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13041.9PPR_21742203.70E-59
PF13041.9PPR_22763223.70E-59
PF13041.9PPR_23794243.70E-59
PF13041.9PPR_24805283.70E-59
PF01535.23PPR4845132.30E-49
PF12854.10PPR_15485762.00E-30
Gene family
Gene familySubfamily
Carbohydrate-Active enzymes FamilyGH28

Gene Ontology
GO termDescriptionCategory
GO:0016020membraneCellular Component
GO:0004519endonuclease activityMolecular Function
GO:0015297antiporter activityMolecular Function
GO:1902600proton transmembrane transportBiological Process
GO:0005975carbohydrate metabolic processBiological Process

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR046960Pentatricopeptide repeat-containing protein At4g14850-like, plant
IPR002885Pentatricopeptide repeat

trEMBL
trEMBL termDescription
A0A3Q7XWI1 _

SwissProt
SwissProt termDescription
PP121_ARATHPentatricopeptide repeat-containing protein At1g74600, chloroplastic

KEGG
KODescriptionEnzyme
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Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G23450 Tetratricopeptide repeat (TPR)-like superfamily protein
Medicago sativa L.MsG0880045105.01.T01 _
Oryza sativa L.LOC_Os06g49185.1expressed protein
Cucumis sativus L.Csa011585 _
Glycyrrhiza uralensis Fisch.Glyur001639s00029619.1 _
Codonopsis lanceolataCl_chr01_21330T _
Arachis hypogaea L.AH13G43380.1Pentatricopeptide repeat-containing protein At4g13650 like

Expression pattern