Gene detail

Detail information of Am01G015880.1 Annotation

Gene ID	Annotation
Am01G015880.1	root hair specific 10

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G015880.1	mRNA	Chr01	102835755	102840371	+

Sequences

CDS:

>Am01G015880.1
ATGCCTCCGAATCAGAACCCCATCCACATTAACAACAACGTTACTAAGGATTTAAAGAGGAAAGGAAACCGTGAAAAGGATTCAGCTCCAGCACCAAAGTCCAACGATTCTGATCCTCCGGAAAGTTCTCCTTCACGTTCGCCACCACCACCGAAGCTTCCGCCGCCGCCTCCTCCATTGCAGTCACCACCACCACCAACATCGTCACCACCACCACCCTCATCGCCGCCGCCATACTCACCTCCTCCACCTTTTCCACCACCGCAATCGCCATCACCTCCACCACCGCAACAATCACCTCCACCACCACAACTTTCGCCTTCGCCATTGCACAATGTGAGTACTTCTTCGTCTCCTTCACAAAAACAATCACATCCGCCGCCGCAGTTTCAATCCCCGTCACCACCTGAGAGGTCGTCTTCTTCTTCACCACCGCCTCCTAAAGCCGTGTACCGTGGTGGTGGGGCCCATGCAAAATCAAGGGGTTCTTCTTCCGCTGGTTTATCGACAAGTGACATTATTGGATATACCCTTGGGGGGATTTTCATTGTGTCCTTAGTAGCCGTAGCTGTTATTTTAATGTTTAGGAGGAGGAAAACAAGAGGGGATGTGTACGCTGCACCTTATATGCCACCCCGTGTGAATAGCTTGCGCATAGCATCAGGTGTTGATGGATATTACTATGTACAGCAACAATCCTTTGGAAAAACCTATGGGAATGGGAACATTGGAGGAAGCAGCATGAAGCATCTAGGAGCTGGTCCATTAGACTCGGCGCAGCCCAAGAGTGCTCAAGTAGCTTTTACTTACGACATGGTTATGGATATAACCAACGTGTTTTCTAGTCAAAACGTGATAGGAGAAGGAGGATTTGGGTGTGTTTATAAGGGAAGTCTGCCAGATGGAAAAGCAGTAGCAGTGAAGCAGCTTAAGGCTGGTAGTGGACAGGGAGAAAGGGAATTCAGGGCAGAAGTGGAAATCATTAGCCGCGTTCATCATCGACATTTGGTATCTTTGGTTGGTTATTGCATATCTGAGCAGCAAAGAGTGCTTATCTATGAGTTCGTTCCTAATGGAAATCTCCATCATCACTTGCATGGAAGTGGAATGCCAGTGTTGGATTGGGCCAAGAGGCTAAAGATAGCTATTGGTGCTGCTAAAGGTCTTGCATATCTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAGTCCGCAAACATACTTTTGGATGATGCTTTTGAGGCACAGGTTGCAGACTTTGGACTTGCAAAGCTAGCCGATGCTGCCAATACCCATGTATCAACTAGGGTTATGGGTACCTTTGGGTACATGGCACCGGAGTATGCAACAAGTGGAAAATTAACAGATAGATCAGATGTTTTCTCTTTTGGAGTTGTCCTCCTTGAGCTTGTAACAGGAAGGAAACCAGTTGATGAAACTCAACCATTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTACTGATTCGCGCCTTTGAGACACGTCACTTTGGTGAACTAGTAGACCCCAGACTCGATAATCACTTCGTGGAGAATGAAATGTTCAGAATGATTGAGGCAGCTGCAGCTTGTGTTCGCCACTCTGCTCCTAACCGACCTCGTATGGCTCAGGTGGTGAGAGCCTTAGATAGTGGAGATGAAATATCTGATTTATCAAATGGGATGAAATATGGTCAGAGCACTGTATATGACTCTGGCCAGTATGACAAAGATATCATGCTATTTAGGAGGATGGGCAATGGCAGCTTTGCTGATTTTGATTTTGATGCGTACAGTAGAGAATACAATCTTTCAAGAGAGACTTCTAAATCCCAACATACATGGATGCACAGTAATTCTAGTGGCGAGTCAGAATCTAGAGCTTTCAACAAGAATAGGAGCTGCAGTACTGAATGTCAATGA

Protein:

Promoter(3k):

>AM01G015880.1
GCACTTCATCGTCGTTTGAATCCCCAAATACACTAGGAAAATTTTCCTTATAGGTTTGGGAGAACAAGTTTTCCTCCATATTAACTTCAGCTTGTTTGCTGGCAAATGATTGTTTCTGGTTTCCATTGCAATTATCATTGCCCTTAATTTTCTTCTTACTCCATTGTAGGATATCAGCTTCTTCAGCTAAGGGTGGCGCGGTCTCCTGAGAGGGAGCATTGTTTGCCCTAGCAGACATCAACGTGTTTCTACAGTTGTTTTTATATTCGGTCCAGTTTTAATTACCTTGCTTGACACTGGTGAACCCAATTTGGATTGTGTATATAGTATTTTGTTTTGGTGAATGAATTGTGTATATAGTTTGGCCAACTGGATTTACATTGTGTCATATAGTTATTTATATGTTTAAGTATGTAAATTAGGTTTCCTAAAAAAGTATGTAAATTAGGTTTAGCTACTTCGAGTATTGGGATAAATGGGATTGTGTCCTCTCAGCAATTGGGCCCAAAATCCATGTTTATGTACTTTTTTTAAGCCTTTTTTTCATTTTAAACACTCATTTTCACAGTTTCCTACCTAAAACAATATTCCCACATTATTAATACATTGAGACAATTATTTTATAAAGATAAGAACAATGGAATCAATATAACGTCAATGCAATCTTAAAAGCAAAAAATCTACAAACACTAATAAATTTTATTTATTAAAGTACCCGGCAACTCAAACATACACGAAAACACCGGAATATTACAACAACGATAATAATATTAAGACAAAAGTGCTCCCGATGTCCCTTATCTTTATTTAAAGTAACGGTGTTTTATCTTTTTTTGTCCCAAATAAGTCCTTTAAGTGTTAAATTTTGAGCAATGTTGCCCTTTTCCGTTAGCAACTGTTCAGTTCCGTTAAAACTGCCTATGTGTTATAATCCATGTCATTCTTTATTATTTTTTACTGACATGTCATTTTTAATTTATTTTTATTAAAAATAAAAGAAACAAATTTTTAGAGAACCAAAATACGCAACCAGTTCCAGATTCATCTCATCTCTCTTTCGTCAGTTTTTGATTCATTTTTGTTTTGGTGCTTAAACAAAAACTAAATCTTTTTCCTCTCATCTCCTTCTTCTTGCAACTCTCGAACCCATTTCCACATTCTTCTTCCAACCCACACAAGCCACAGAATCTGAATCAGATCCTTCCAACGCCGAACCTGAACCAGAAAATGATTTCGACGGTATCACAGAAAAACGAAACAAACCCCACAACATTTTGCAAAATCTGAATCCTAACATAAAGGTGAATGTGTTTTCATCTCGCAATCCGAACCAGAAAAGAAAGGCAAAAAAAAGGAGCTTGAAGCTCCACCACCGTCGCAAACCTCCACCACCGTAATACTCTCTCTCCGTACAACCACCAAAAATGAATGGAACTGGTGAAGGAGATGAGAGAAACTTCTCAGATTCATTTTTTGATTTCTTGAGTTCCCTTCTCAGATTTGTTTTGTATTTCATTTCCGTTCGTTTTGGATTCCGATTTCATTTCCCTTCTCAGATTCGTTTTTTGATTTCTTGAGTTCCTGGGTTTCTTTGATTTCTTGAATCTTGAACATGATGAACAAAAGGTGCTGCTGATCTGGGTTCCTGGTTTACAGAACTGTTTTTTTTATTTCTTGAATATGGGTTCCTGATTTCTTGAACATGATTTCTTGAACATGATGAACAAAATTTCATTTTTTTAATAAAAATTAAGTAAAAAAATTGTATATTGCCACGTAATTAGCCAGATAATCAACATAACAGCCACATAAGCCAATTTTAACAGAGTTGGACGGATACCAACGGAAAAGGATTTTGTTGCCAAAAAATCAAAACATAAAGGACTTATTTGGGACAAAAAAAAGATAAAGGACTAAATCGTTACTTTAAATAAAGGTAAGGGACCTCGGGAGCACTTTTGCCTAATATTAAAGACATTTGAACTGAAACCTAGAGAACAAGTTTTTACTAGTACAACATACTAGATAGTGAAGTAGCAAAACACCAAAAAACTTCGAAGCTAGAGTCTAGAATCTTCGTGATACGTAACTATTTTTGTTCATTGCAAATTGTCTAGCTGTGAAAATCATTCTTAGTATTGCGAATAGATTGAACCTTAAAGTCTTATTTTCACTTGATCTTCACTCCTAAACTATCCTAAATCCAAATTGAATTTCTACGACAACCAATAATCTGACCGTTCCTATATATTGAATTTTCAATTTTAGTAGAACGTTAGGGTTTCACATATATTTCGGATATTACACTTAGAGAAATGTAACTTTTGTTTCAATACTAAAGGATATTGTATTGAATTTTTTTTAACAAAGACATTGTAATATTGTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTATTATTGTTGAAAGTGAAAGAAACTTAAAGCACATGTATCATTAAGCAAGCTAAAGTTAGCAGTAAATAAAATCGGGTAAAATGAAATCTATCGGGTAATTACCCAACCCGTTTGTAAGCTCGATCACGGTTTAAATTGCGCGGCAACCCGAGATTCAAGGAGAACAACATCCACATCTAAAAAATTATACGTAGAAACAAAATCTATCCGTGTCTATCTTTTCCCTAAAATACAAACAACACAGAGAGATTATAGGCCTAGTGAAGATTTTGCAAAGGCCAAAAAAACTTTTCTTACTTTTTTGATTTTCATTCGTTCAATTCAGAGTCTCTCTCTTTCTGAACGCGTTGCATCGAGCTGGCAATTCTGTTCGTCACAGAACTTGCGCAGTTCGAAGAATCCAGCATCATCGTTCAATGCCGGAACAAAAACATAGCCACCAAAGTTTTTTTTGTTGTTGTTGTTTCTCAAAAACAAGTTTTGTTGGTTTTCTTTTGATTAGAAGCAACTATTCCATTGGCATTATTGTAATGCCATTGGTAGAATCAAATTGAGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	283	552	5.70E-48
PF00069.28	Pkinase	282	484	3.00E-45

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.6.2:RLK-Pelle_PERK-1

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0019901	protein kinase binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR047117	Proline-rich receptor-like protein kinase PERK1-13-like

trEMBL

trEMBL term	Description
A0A1S2YTU6	_

SwissProt

SwissProt term	Description
PEK13_ARATH	Proline-rich receptor-like protein kinase PERK13

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G70460	root hair specific 10
Medicago sativa L.	MsG0580025768.01.T01	_
Oryza sativa L.	LOC_Os06g29080.1	expressed protein
Cucumis sativus L.	Csa009738	_
Glycyrrhiza uralensis Fisch.	Glyur002855s00037377.1	_
Codonopsis lanceolata	Cl_chr03_36360T	_
Arachis hypogaea L.	AH03G40590.1	Proline-rich receptor-like protein kinase PERK13 like

Expression pattern