| Gene ID | Annotation |
|---|---|
| Am01G014890.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G014890.1 | mRNA | Chr01 | 94625572 | 94627434 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01535.23 | PPR | 203 | 230 | 1.40E-35 |
| PF13041.9 | PPR_2 | 201 | 247 | 1.50E-35 |
| PF13041.9 | PPR_2 | 304 | 351 | 1.50E-35 |
| PF14432.9 | DYW_deaminase | 539 | 620 | 3.10E-34 |
| PF20431.1 | E_motif | 423 | 490 | 3.70E-13 |
| PF20430.1 | Eplus_motif | 496 | 518 | 7.10E-07 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0005515 | protein binding | Molecular Function |
| GO:0000987 | cis-regulatory region sequence-specific DNA binding | Molecular Function |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Molecular Function |
| GO:0006396 | RNA processing | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR046960 | Pentatricopeptide repeat-containing protein At4g14850-like, plant |
| IPR002885 | Pentatricopeptide repeat |
| IPR046849 | E+ motif |
| IPR046848 | E motif |
| IPR032867 | DYW domain |
| trEMBL term | Description |
|---|---|
| A0AAN9RCX9 | _ |
| SwissProt term | Description |
|---|---|
| PPR85_ARATH | Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| K23541 | Ca2+/H+ antiporter, TMEM165/GDT1 family |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G59720 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0580026450.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g09370.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa005842 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001533s00032757.1 | _ |
| Codonopsis lanceolata | Cl_chr03_03450T | _ |
| Arachis hypogaea L. | AH03G41650.1 | Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial like |