| Gene ID | Annotation |
|---|---|
| Am01G014480.1 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G014480.1 | mRNA | Chr01 | 89899637 | 89940839 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00415.21 | RCC1 | 309 | 357 | 5.20E-74 |
| PF00415.21 | RCC1 | 360 | 411 | 5.20E-74 |
| PF00415.21 | RCC1 | 416 | 464 | 5.20E-74 |
| PF00415.21 | RCC1 | 480 | 529 | 5.20E-74 |
| PF00415.21 | RCC1 | 532 | 581 | 5.20E-74 |
| PF00415.21 | RCC1 | 586 | 633 | 5.20E-74 |
| PF13540.9 | RCC1_2 | 347 | 371 | 2.20E-28 |
| PF13540.9 | RCC1_2 | 568 | 597 | 2.20E-28 |
| PF08381.14 | BRX | 947 | 1002 | 2.20E-24 |
| PF01363.24 | FYVE | 637 | 703 | 1.70E-12 |
| PF16457.8 | PH_12 | 16 | 122 | 4.20E-06 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR017455 | Zinc finger, FYVE-related |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR000408 | Regulator of chromosome condensation, RCC1 |
| IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II |
| IPR001849 | Pleckstrin homology domain |
| IPR011993 | PH-like domain superfamily |
| IPR000306 | FYVE zinc finger |
| IPR013591 | Brevis radix (BRX) domain |
| trEMBL term | Description |
|---|---|
| A0A1S2YWU9 | _ |
| SwissProt term | Description |
|---|---|
| PRAF1_ARATH | PH, RCC1 and FYVE domains-containing protein 1 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G69710 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| Medicago sativa L. | MsG0880044766.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g31920.1 | FYVE zinc finger domain containing protein, expressed |
| Cucumis sativus L. | Csa008057 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000371s00032980.1 | _ |
| Codonopsis lanceolata | Cl_C04826_unscaffolded_00020T | _ |
| Arachis hypogaea L. | AH03G42210.1 | Probable E3 ubiquitin-protein ligase HERC1 like |