Gene detail

Detail information of Am01G013310.1 Annotation

Gene ID	Annotation
Am01G013310.1	Protein kinase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G013310.1	mRNA	Chr01	72426917	72429691	+

Sequences

CDS:

>Am01G013310.1
ATGAGTTGTTGTTCTCACCTTTTCAGAAAAAAAGGTCCTTCCTCAGCCACACGATTCACCGCTGGAGCTGATATAGATATTTCAGAAATTCAGAATGTCAAGTTTTACACTTACAAGGAACTGCGAATTGCCACGGAAGGTTTTAGTCCCGCAAACAAAATAGGGCAGGGAGGCTTTGGATCAGTCTATAAGGGAAAGCTGAGAGATGGATCCCTGATAGCTATAAAGGTTTTATCAGCTGAATCAAAACAAGGGGTCAAGGAATTCTTGACAGAAATTAAGGTGATAACTAGTATAGAGCATGAGAATCTAGTGAAGTTGTATGGATGCTGTGTGGAAGATAACCACAGGATTTTGGTATATGGTTATCTTGAGAATAACAGCCTAGCACAGACACTACTTGGTTCAGGCCATAGTAGCATTCAATTCAATTGGCATGTAAGGCGTAACATTTGCATAGGTGTTGCTAAGGGACTTGCATTCCTTCATGAGGAGGTTAGGCCACATATTATTCATAGAGACATAAAAGCAAGTAATGTACTACTTGATAAAGACCTCCAACCCAAAATTTCAGATTTTGGGCTTGCAAAGCTTATTCCTCCAAACCTTACCCATGTTAGTACAAGGGTTGCTGGAACGGTTGGTTATGTGGCACCTGAGTATGCGATACGAAATCAAGTGACAAGAAAATCAGATGTCTATAGTTTTGGAGTTCTACTGTTAGAAATTGTTAGTGGAAGGCCTAACACAAACAGACGCTTACCTGTTAAAGAACAGTATCTTCTTACAAGGGCATGGGAATTGCATGAGAAAGGGGAGCTAGAAAGGTTGGTGGATGCTTTTCTAGAAGGGGACTTCAATGTTGAAGAGGCAATCAGGTTTTGTAAGATTGGTCTTCTTTGCACACAGGATTCTCCTCAGCTCAGGCCTTCTATGTCCACTGTGCATCACATGCTTATTGGTGAAAAAGATGTGAATGAGGACAATATGACAAAACCAGGTATGATATTTGAATTTGTAGAAGCCTATGAGGAAGGGAATAAAAAAGGCAAGGCTAATATGGAAAGTAAAAGTACATCTTTGTTGGCTGGTTCAGGGAAACAAGATGATTCATCTTCATCAGGAACAGATACTTCATTTGCTACCATGACTTTCACTGCAATCTATGATCGATGCAGTTAA

Protein:

Promoter(3k):

>AM01G013310.1
GGTGTCTTGGTGCTGTTTGAGCTAGGTGTGAAGGCTCAAGTATTGGTGTTGTTGGAGCTAGGTGTGAAGGCTCCAAATCTTGGTGTTCCGTTGTCTCGGGTAGTTGGGTGTTTCGGTGTCGTTGGGCTAGGTGTGAAAGCCCAACTTTGGTGATATTCGGTGATTGATTTCTTGGTGTGTCACATTGTGGCTAATTTTTTATGATTGTCTGTGTGCATTCATGGTGTCGCAAACAGCATACGCATTTATTTCGGTGAAGGCCTTTGGTCTTGGAGCTGGGTGTGAAAGCTCAATTTTTTCTAAAAATAGTGAGCCGGGTGTGAAAGCTCAATTTTTGTGAATTGGTGAGCCGGGTGTGAAAGCTCTCAATCTTGGTGACGCCCCTATTTACGGGCAAAACTTTCGGTGATTTGGTACCACATGCATATGCCCATTGGTATTATCATGACATTTGGTGACTGATTGTGGTGTTTACAATTTGACGTATGTTTATAATTCGATGTGTGTAGTGGAGTGGTATATATGGTTGTCATATTCTAGCATATTTCTTATCATTTACGTTATTATATTGAAGATATCTCACCCCTTCTGTTTGAATGTTACCCCTATGCGGTAACGTGCAGGTGATCACGAGTGAAGGCTTAGCTACCTTCGCTAGTCTGAGTCAGTGTCCTTTGCTTTGATATGTAACACTCAAGGGGGGATAAACGTTAGACTTTGGCTGCTGCATTTTATTTGTTTGGAGTCCATTCAGGACGTTATGATTTTATGTTTTGAAACTTATTTCTATTCCGCTGCGTGGTGATGTATTTTTTGGCGATGTGGTTAACTAAACCGGTGTTATGGGCTTTGCCCCTTTTGACAAAGTGTTATATATCGTATGTGACTTTTTGGTTATCGATGAATGTGTGACATCTCTTTTCGAAGTATGAAATAATTTTTTTTGTAACTCTGATTTTATTAAATAATTACCGGGTAGAAAAGGGGTGTTACACCTGCCATCTTCCATTACATCTGATAGAGATCCAATCTTTTTAAGCGAAGTTTAGTCTGAGTTTTTCTCTCTAAAAGGTGTTGCACTTAACAAATCTAGTGTTTATCATCACCAAACAGATGGCCAGACAGAGATTGTGAACAAAGCTCTAGAAACTTACATGCGTTGCATGTGTTCTGAACTAGCATCCAGTTGGTCTCAATGGCTGTCCTTGGTAGAATGGTGGTATAATACCTCTGTTCACCCCTCTATTCGGTGTATTCCTTATGAAATTGTCTATGGTCAAGCACCTCCACTTCATTTACCTTACCTGCCTGGTGAATCTAAGTCGCTGACAGTAGACAGATCTCTCACTGCTATTGAAGATGCTCTCACAGAATCGCATGAAACAGTTGGCTAACAATCATAGAAGTGACAGAATTCTCTATTGGTGATTATGTTTTCATGAAACTTCAACCCTATAGGAAATTCTCATTAAGAAATCAGGCTTTCCATAAGCTCAATCCAAAGTTTTATGGCCTTTACAAGATTTTGGACAAGATTGGCAAGGTTGCTTACTAGCTTGAGCTACCTCCTGATTCAGGCATCCACAATATTCTCCATGTGTCTCAACTCAGCTCTGCACTCCACCAGCAACTACTGTGATACAACATCCTACTGTTCCTTCTGTTTTCCATCTAATGGTGAGCCTAAATCTATCTTGGCAAGGAAAATGGTGAAACGTGGGCGCTTGGCAACAACAAAAGTGCTTGTTAAATGGAAGAATCATGCTCTTGAGATTGCTACATGGGAGTTTTATTATGACCTCCTTCGTGATTTTCCTCAATTTCACTTTTGAGGTAGAGGAGAAGAGTGCTCTCTAGGGGAGGGTATTGTGACAGAGTCACACTAGTAGTACCCTGGTTCTATTTGGTACTACTAGTCTCTGTTTTACTGAGTTACAGCCGAGCACTTTAGAAAATATTCCCAAGTGCATATACACCCTATCATTTAATGAAAAGTACACATTGAATTCAGTTTTTTTTTATAAGCAATGTTAGTGGGGTGAGGGAATGTTAGTTTCTGGGGTTTGAACCCGAGACCTCCTTCTTGCACTCTTTTGGTGTACTCCTTTGATATCCCTTTGCTCGCCAACTGAGCTACTTACGAGATTCAAAATTAATACTCTCTCTCTCTCTTACCTGTTATACTACTAGATTTACTAAACCTAGCTAAGAGCCCTCTCTCCGAGCTTCATTCACTCTATTGGAGTTCCTTTTGATCCAAAATCTGTCACAAGTACCCTAGTACTCGGCTTGATACAATCTTTTCTTGTAAAAAAAAATTAGTTTATCCGCTCTTCCCAACTTTTCTCTTCCTTTACTCTCTCTTCACTAATTCATACCTTTCAATCAAAAGTGAAAAAGGCCAAAAGGCTACGGCGGGGAAAATGGCTAGTGAGGGACAAGTAGTTTCATGGTTAGCGCCAAGCCTTAATCGTTGTTGATTAATAAAATTTCCCAGAAATTGCAGGAAGGTTAGTAAAGAAGGTTAGTAACGAAACTTACCTCCTTTTCGTCCGTCATTTTTGAATTACTTTGGTCAGTTGGTGGTGCCTTTTTGATGGAAGAAAGAATTGTATTTTACTGAGATAAGCTTGGGTTGACTTTGCTTCCGAAAAGAAATACTAGGTTTGACTTTCATTTAACTAGAATAAACTATTACAGTATTCTTATTTTTTGACAGATAGAATAATAACTAATATTTAATATTACGTTTTTGTTTTTTTCATTGACTGGATGTTACTTTTTTGGTTGAATGAAATCCAGTATTATTATATTAATTAATAGTAGCTTGAGATTTGAGAACATTCAATATTCAAAATTATTCAAAATTAATAGTAGCCTGACCCTTCTCCTTCTGCAACTGTCGCTGTTGAGTGATTCGTGAAATTCAAATCAGCTTAAATCTCAGTTTTCTATTTTACAGCTCTGGGTTTCATCAATTGGAGCACCCTAGTTATTGTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	51	251	1.60E-48
PF07714.20	PK_Tyr_Ser-Thr	52	317	1.10E-46

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.7.2:RLK-Pelle_DLSV

Gene Ontology

GO term	Description	Category
GO:0004674	protein serine/threonine kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0004714	transmembrane receptor protein tyrosine kinase activity	Molecular Function
GO:0046872	metal ion binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0AAN9KL70	_

SwissProt

SwissProt term	Description
CRPK1_ARATH	Cold-responsive protein kinase 1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G16670	Protein kinase superfamily protein
Medicago sativa L.	MsG0880044486.01.T01	_
Oryza sativa L.	LOC_Os02g06930.2	protein kinase, putative, expressed
Cucumis sativus L.	Csa004248	_
Glycyrrhiza uralensis Fisch.	Glyur000018s00003680.1	_
Codonopsis lanceolata	Cl_chr04_51780T	_
Arachis hypogaea L.	AH18G16250.1	Putative LRR receptor-like serine/threonine-protein kinase At1g56130 family like

Expression pattern