| Gene ID | Annotation |
|---|---|
| Am01G013110.1 | RNA helicase family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G013110.1 | mRNA | Chr01 | 69889189 | 69892657 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF04408.26 | HA2 | 649 | 723 | 3.90E-20 |
| PF07717.19 | OB_NTP_bind | 797 | 874 | 9.30E-20 |
| PF00271.34 | Helicase_C | 457 | 587 | 4.60E-13 |
| PF00270.32 | DEAD | 264 | 415 | 1.10E-06 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0009536 | plastid | Cellular Component |
| GO:0016020 | membrane | Cellular Component |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0005975 | carbohydrate metabolic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR007502 | Helicase-associated domain |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR002464 | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site |
| IPR011709 | DEAD-box helicase, OB fold |
| IPR011545 | DEAD/DEAH box helicase domain |
| trEMBL term | Description |
|---|---|
| A0A3Q7YE71 | _ |
| SwissProt term | Description |
|---|---|
| ESP3_ARATH | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 |
| KO | Description | Enzyme |
|---|---|---|
| K12813 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 | [EC: 5.6.2.6] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G32490 | RNA helicase family protein |
| Medicago sativa L. | MsG0680034132.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g17432.1 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed |
| Cucumis sativus L. | Csa005143 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001978s00029871.2 | _ |
| Codonopsis lanceolata | Cl_chr04_50310T | _ |
| Arachis hypogaea L. | AH20G30500.1 | Uncharacterized protein like |