| Gene ID | Annotation |
|---|---|
| Am01G012860.1 | rhamnose biosynthesis 1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G012860.1 | mRNA | Chr01 | 68190717 | 68194311 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF16363.8 | GDP_Man_Dehyd | 10 | 315 | 7.70E-76 |
| PF01370.24 | Epimerase | 9 | 251 | 1.00E-68 |
| PF01370.24 | Epimerase | 416 | 552 | 1.00E-68 |
| PF04321.20 | RmlD_sub_bind | 8 | 318 | 3.90E-31 |
| PF04321.20 | RmlD_sub_bind | 387 | 557 | 3.90E-31 |
| PF01073.22 | 3Beta_HSD | 10 | 235 | 9.00E-29 |
| PF02719.18 | Polysacc_synt_2 | 9 | 280 | 1.10E-25 |
| PF07993.15 | NAD_binding_4 | 11 | 193 | 7.70E-25 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0050377 | UDP-glucose 4,6-dehydratase activity | Molecular Function |
| GO:0010280 | UDP-L-rhamnose synthase activity | Molecular Function |
| GO:0051555 | flavonol biosynthetic process | Biological Process |
| GO:0010315 | auxin export across the plasma membrane | Biological Process |
| GO:0008242 | omega peptidase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR029903 | RmlD-like substrate binding domain |
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR016040 | NAD(P)-binding domain |
| IPR005888 | dTDP-glucose 4,6-dehydratase |
| trEMBL term | Description |
|---|---|
| A0A396GJX8 | _ |
| SwissProt term | Description |
|---|---|
| RHM1_ARATH | Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 |
| KO | Description | Enzyme |
|---|---|---|
| K12450 | UDP-glucose 4,6-dehydratase | [EC: 4.2.1.76] |
| K01710 | dTDP-glucose 4,6-dehydratase | [EC: 4.2.1.76] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G78570 | rhamnose biosynthesis 1 |
| Medicago sativa L. | MsG0880044331.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g17000.3 | NAD dependent epimerase/dehydratase family domain containing protein, expressed |
| Cucumis sativus L. | Csa004005 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001036s00023778.1 | _ |
| Codonopsis lanceolata | Cl_chr04_24130T | _ |
| Arachis hypogaea L. | AH13G21390.1 | Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 like |