Gene detail

Detail information of Am01G012560.1 Annotation

Gene ID	Annotation
Am01G012560.1	cell division control 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G012560.1	mRNA	Chr01	66019582	66033695	-

Sequences

CDS:

>Am01G012560.1
ATGGCAAGTAAAGAAAAAGATTATGATTCAACCACCTCTGATTCACTTATAATACGCCTAGTAGAGTGCGGATTCTGTCGTCGTCGCCGTCTTAATCAGCGGAAGCAAATTAATCATAACTTACATGGATTCGACGTGGAGGTTTTCGATCATCTCGGCGCTGGTGGCTACGGCAAAGTTTTCCGTTGCCGCGATCTCAACACTAACCGAATTGTAGCCATTAAACAAATCTACATTTATGGAATACAGGACGGCGTTCCAAGTTCTATTATTAGAGAAGTCTCGCTTCTTAAAGAACTCAACCATCCCAACATTGTCAGGTTGCTCGATGTATTGAACAAAGACAGGAGATATGTGAATCTTGTTTTTGAGCATCTTGATTGTGATCTTTATAACTATATCAAAGATCAACGTTTCCCTGATGATTCCGTGTTTATAAAGAGTTTTTTGTACCAGATACTGTCAGCATTGGCTTATTGTCATTCTCATAAAGTTATCCACAGAGACGTAAAAACAAAGAATATACTAATTGATGAATCTTCAATGATGATCAAGCTCGCTGATTTCGGTTTGGCTAGAGAATTTGCAGATCCTGACATGTTATATACTGAGATGGTAGCTACTCACTGGTATAGGGCACCTGAAATCTTATTTGAAACCGGAAAATATTCAACTGCAATTGATATGTGGGGTGTGGGCTGTATATTTGGAGAGATGGTACTTAAACAACCTATATTTCGAGGATATCAATTAGAGGCGATTTTCAGGATGTTAGGAACACCAACAGAGGAAACTTGGCCAGGAGTCACTAAGTTATATCCCAACCTTAAAAACACCTGTCCCGAATTTAAACCAGTGGATCTGTCATCAATGTTTGCTGATCTAAATCCAGATGGCCTTAATCTTTTATCGAGAATGCTTTGCCTGGACCCAAGTAAAAGGATTACTGCTGAAACTGCTCTAAAGCATCCTTACTTCAATGGTTTGGATTTGATATAG

Protein:

Promoter(3k):

>AM01G012560.1
TTGAGATGGTGGAATAAGGAGGTCTTTGGGCAGCTTGACTTCAACATTGATAATGATGTAAAGGATCTTAGTGAGATAGATTCCACACTTGTAAATTCTTTTGATTCAGAAGTGGTGTGGCGGGGAAAGGAGGTTTCAGAAAATTTTTGGAGCGATATCAGATTGAAGGAGAGATTGTTTTGTCAAAAATCTAGAGCTAGGTGGATTAGAAAATGTGATTCTAACACTAAATATTTTCATTCTCTTCTGAATTATAGAAGGAGGGGGAATAACTTGTTACTTATGGACGACAGAGGGGCGTTGATCGAAGATGTGGAGGAAGTGAAGTTGAGAGTTAAAAATCATTTTGAGAATCGTTTTGAGAAACCTCATCATGATCGCCCAATTCTTGGGAGACTAGACTTCAAGCAAATCTCTAATGATGATAACTCTCTTTTGTTGATGCCGTTTACGGAAGAGGAGATTAAAGGGAAAATTTGGAATTGTGATGTGAATAAGAGTCCGGGACTGGACGGTTTTAATTTGTGCTTCATAAAGGAGGGATGGGGATTCTTTGAAAGACGATATAGTGGCTACTTTTAATGAGTTTCATTCGAAGGCTTCCCTCCCAACAAAAGCCTTCACGGCGTCTTTTATCGCTCTAATTCCTAAGAATGACCATCCCCAGAGTTTGGGCGAATTTTGACCTATTTGCCTAATTGGTTGTTTGTACAAGATTTTGGCCAAATTAAAGTCTTAGCTAGTCGTTTGAAGCGAGATCTCCCCAAGGTTATTTCTAATTGCCAATCCGCTTTTTTGGAAGGCCGTAATATCTTAGATGGAGTGTTGGTGGTGAATGAAGTGGTGGACTTGGCGAAACGAAGAAAGGAGGATTGTTTCATGTTCAAAGTGGATTTCGAAAAGGCGTGTGACTCTATTTCTTGGAGTTTTTTGGCGTATATGATGAATAGATTGGGTTTCGGTCCGGAGTGGACTAGATGGGTGAAGGCTTGTGTTTTTTCTAGCTCTATGTCGGTGTTGGTTAACGGTAGCCCCACTGAGGATTTTCAAGTCGGTAGAGGACTCCGGCAAGGAGATCCTTTATCCCCCTTCTTGTTTTTGATTGTTGTCGAGGGCTTGACGGCTATGATGGCCAAAGCTGTGGAGATAAGTTTTTTAATGGAGTTCAAAGTTAATGATTCTCTTCGGTTTTCTATCCTTCAATTTGCTAACGATACTATTATGATGGGGAAATCTACTTAGGGGAATATTTGGTGTATAAAATCCATTCTAAGAAGCTTTGAACTTGTTTCGGAGTTGAAAGTAAATTTCCACAAAAGCAAGCTCATAAGGATAAATGTCTCAGGATTTCTTGAATTCGGCTTCTATTTTCCTTCATTGTCGATCGGGGTTTATTCCTTTCAAGTTCTTGGGTATTCCCGTGGGGGCTAACCCAAGAAGGAGTTCTACCTGGAAACCAGTGATCGATAAGCTCCGCAAAAGGCTCTCCTTGTGGCAAGGGCGTCATTTATCTATGGGTGATCGGGTAACCATATCTGTGGGGGCTAATAAATTCTGTTTTAAATTCTATTCCCCTATATTATTTATCTTTTTACAAGCTAGGCGTCGAAAGTTGTGATCAAGAGCTTGATCAAAATTCAAAGAAACTTTTTGTGGGGGATAAAAGATGATGACAGAGGTATGTACTGGCTGACTTGGGATAAGGTGTGCAAGCCCAAGGAGGAAGGAGGTCTAGGAGTGAAAAATATTGAGCTGTTTAATGTTGCTTTATCAGCAAATTGGAAGTGACGTATTCTGATGGTTGAAGATGCTCCTTGGAAGGATATTTTTTCTCATCACTATGGTGATTTGCAATCTTATTTCTTCTCAGAAAATGGATCGGAAGGCGGTAGAACGAATTCCTCACTGTGGTGGCGTGACCTTCGGAGTGTGGGGGAGGATAGATTTGCGGGTGATTGGTTCTAAGCGAACATCAAGAGGGGCCTGGGTGATGGTCAAGGCGTGAACTTTTGGAACCATCACTGGGTTGTGCAATGCCCATTGAAGCTGGATTTTTCTAACGTTTTTGTAGGTTGTTGCAATAAGAATGCTTATATCGCTGAGCTAGGCGTTTGGAATCAGAATCATTTTGCCTTTGATTTGCAACTTCTCAGCGACGACGGATCATCGTTGCTTGACATTCTTAGAGACATCGAAGTATCCCGAGGCCGAACATATTCTTGGAGCTGGTTATTGGAGCCTTCTCATTGCTTTTCGGTGCGATCTTGTTATCGTTATTTGTTATCAGCTGATCCGGTTTCTACAGTGGGCAATAATAATGACACTTCTGATTTTAAGGATCTTGGGCAAACGGCAATTCCTTTGAAAATATTAGTATTTGGGTGGAGATTACTTTTAAATGCTTTACCGGTGCGAGAGGTGTTAAGGAGTAGACGAATTATTCATACAGAGAAAGGGGCGTTGTGCGTTTTGTGCAACAATCATAGTGAGGCTCTTCAACATCTTCTACTCGATTGTGATTTTTCAAAGAAGGTGTGGCGGGAGATTGAGCATTGGCTTGATGTACAACTTACCTATTTCCTTAACCTTATATCAACATTATATTCATTTCAACGAGAGCATATGGGGGCCGTCCCTGTGTAGGATAACATTGGTTTGGTTGGATCCGCTCTTGCCCAATCCGTTTTTCTTTTTTCATTTCAAAGCCAAAGCTTCTATTAATCAGTCACTCTTTTCTTTTTTGCGTAATGATTCATGCGGGATTGTTGCATGATGTATTTCATTCGTCATAGAGTCAACGGATAACGAATTCCGTTTAAGCAGTTACTGAACTGCCACGTGGCAGGATTCAATTTGCAACTGAAGTTACTTATTCAATTAGTTTACTTAAGAGCGGGAAATGCCAGTCAACCAAAGATCCGCTTCCTAGTTCTTCATCTCGTTCTTTTCAACAATATCAACCCACTAGCTAATTTCTCTTCTTTGCGTTTCTGTTTCAGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	48	326	2.90E-71
PF07714.20	PK_Tyr_Ser-Thr	48	242	1.50E-31

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.1:CMGC_CDK-Pl

Gene Ontology

GO term	Description	Category
GO:1902750	negative regulation of cell cycle G2/M phase transition	Biological Process
GO:1901991	negative regulation of mitotic cell cycle phase transition	Biological Process
GO:0051301	cell division	Biological Process
GO:0006974	DNA damage response	Biological Process
GO:1902680	positive regulation of RNA biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0AAN9KCG7	_

SwissProt

SwissProt term	Description
CDC2_VIGAC	Cell division control protein 2 homolog

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G48750	cell division control 2
Medicago sativa L.	MsG0880044305.01.T01	_
Oryza sativa L.	LOC_Os03g02680.2	cyclin-dependent kinase A-1, putative, expressed
Cucumis sativus L.	Csa021443	_
Glycyrrhiza uralensis Fisch.	Glyur000310s00013628.1	_
Codonopsis lanceolata	Cl_chr01_30940T	_
Arachis hypogaea L.	AH13G48820.1	Cell division control protein 2 homolog like

Expression pattern