Gene detail

Detail information of Am01G012460.1 Annotation

Gene ID	Annotation
Am01G012460.1	Leucine-rich repeat transmembrane protein kinase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G012460.1	mRNA	Chr01	64931807	64954442	-

Sequences

CDS:

>Am01G012460.1
ATGTTAATTCGACGGTGTTTATCCCTACATCTTTTCGCTTTTGCAATTGTTGCTGTTTTTTGTGTTAACGTTGTACGAGCTCAAAGTTCAAATGTCACTACTGATCCTTCTGAAGCAAGAGTTGTGAATTCAATCTTCAACAAATGGAGCATATCTGCAGATCAAACTCAATGGAATATAAGCGGCGAACTATGCAGCGGAAATGCCATCGACAGCACTACCTCAATCGACGTCCCTGCTTACAACCCATTCATCAAATGCGATTGTTCCTTCGACAACCAAACCACTTGCCGCATCACCGCACTGAAGGTTTATGCATTGGACGTGGTTGGTGAAATTCCACCCGAATTATGGACCCTAACTTACCTTACCAATTTGAAAATTGGCCAGAATTTCTTAACGGGTTCTCTGCCTCCAGCCATTGGAAATCTGTCTCGTATGCAATACCTGAGCTTGGAAATCAATGCTTTATCAGGGGAGCTTCCAAAGGAATTGGGAAATCTTACTCAGTTGATTAGCTTGGGTTTTGGGTCAAATAACTTCTCAGGATCTTTACCTTCTGAACTTGGGAAACTGGTAAAATTACAACAGCTCTACCTTGATAGTTCTGGAATCAGTGGTCCAATTCCTTCCTCATTCGCAAGCCTTAAGAGTTTGGCTACAGTATGGGCTTCAGACACGGAACTCAGTGGCAGTATACCAAACTTCATAGGGAATTGGACCATGCTTCAATCCTTGAGGTTTCAGGGTAATTCTTTTGAAGGTCCAATGCCGTCATCGTTTTCCAATTTGACTTCCTTGACAGAGTTGAGAATAAGTGGTATATCTAACGGAAGCTCCTCACTGGAAGTAGTACGGAATATGAAGTCTTTGACTATCTTAGACCTGAGGAATAACAATATTACTGGTTCAATTCCATCCGCAATTGGAGGATTTCAAAATTTGACCCTGCTGGATTTAAGCTTCAATAACATCTCAGGACAAATTCCTGGATCCATATTCAATTTGAGTTCGCTCTCTACCTTGTTTCTTGGAAACAACAATTTTAGTGGCTCTCTCCCTCTGCAAAAGAGTTCATCTCTTCGCAACATAGACTTATCATACAATGATCTATCAGGAAGCTTCCCATCTTGGATAAACGAACAAAACCTACAACTGAACTTAGTTGCCAACAACTTGACAATAGAAAATTCGAATAGCAGTGGTTTGCCTACTGGGCTCAACTGTCTCCAGAAAAATTTCCCATGCAATCGTGGTGCTGGAAGATATTCTGACTTTGCTATCAAATGTGGTGGTCCCCAAATTACATCCACTAATGGAATTGTGTATCAAATGGACAATGACTCACTTGGTCCTGCTACATATTTTGTTACTGATACAGATAGATGGGCCGTTAGTAATGTTGGATTATTTACTGGGAACAGCAACCCTCTGTTCAAAAGTTTTGTGTCTAATCAGTTCACTAATACTTTGAGCCCAGAGCTCTTCCAAACAGCTCGGCTCTCTGCATCATCATTAAGATATTATGGCCTGGGGCTGGAAAATGGTTTCTACAACATCACCCTCCAATTTGCGGAAACAGCTATCCTGGATTCTGCCACATGGAAAAGTCTTGGGCGACGGGTCTTTGACATTTATATTCAGGGGACTCGTGTTCTGAAGGATTTTGACATACAAAGAGAAGCTGGAGGTGTGTCTTACAGAGCTGTCCAAAAGCAATTTAGGTTTGAAGTGAAAGAAAACTATCTCGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCTACCCAAGGTACTTATGGGCCCTTGATCCAAGCCATCAGTGCTACCCCAGATTTCATACCTACTGTCAGCAACAAACCTCCAAGCAGTGACAAAAATAGAGCTGGTCTAATCATTGGAATTGTTATTGGTGTTGGAGTTGTATGCTTTCTATCCGTTTTTGCCATTTACTATACAATTCAGAGAAGAAAACGTCTTCGCGATGATGAAGAGCTTTTAGGCATTGATACGAAGCCATACACTTTCAGCTATTCTGAGTTAAAAAATGCTACAAATGACTTCAATTTTCAGAATAAGCTTGGAGAGGGAGGTTTTGGACCAGTTTATAAGGGGACACTTAATGATGGAAGTGTTATTGCTGTAAAACAACTATCCGTAGGATCGCATCAAGGAAAGAGCCAGTTCATAACTGAGATTGCAACTATATCTGCTGTGCAACACCGTAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTACTTGTGTATGAGTACCTAGAAAATAAAAGTCTTGACCAAGCATTATTTGGCAACGTTTTATCCCTCAATTGGTCCACGCGCTATGATATCTGCCTGGGTGTTGCAAGAGGTTTGGCTTACTTACACGAAGAGTCACGGCTCCGTATTGTACATCGTGATGTGAAGGCTAGTAATATTCTGCTCGACTCTGAGCTTGTCCCGAAAATATCTGATTTTGGGCTGGCCAAATTGTATGATGACAAAATGACCCATATAAGCACTCGTGTTGCTGGGACAGTTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATGTTTTTTCCTTTGGTGTTGTGGCTCTGGAGTTGGTTAGTGGGAGGCCAAATTCTGATACAAGTTTGGAAGGAGCAAAGATGTATCTTCTTGAATGGGCTTGGCAGCTTCATGAAAACAACTGCATAACTGATCTGGTAGATCCTCGACTATCAAAAGTCGACGAGGATGAAGTGAAACGCCTTGTTGGGATAGCACTTCTGTGCACTCAAACATCTCCAACTTTACGGCCTTCGATGTCACGTGTGGTGGCAATGCTTTCAGGAGACATGGAAGTGAGCACTGTGACATCAAGGCCTGGATACTTGACTGACTGGAAATTCGACGATGTAACCACCTCGATGACCGGCTTTGTAATGAAAGTATCAGATTCAAGTTACTATGACTCATCAGCTAGTACCAGCATAGTTGGTGGTGGTGACCATTTTCCAAATGATCCTTCTAAATCCATCCTTGGTGAGACTCTGAGCCATGGAAGGTAA

Protein:

>Am01G012460.1
MLIRRCLSLHLFAFAIVAVFCVNVVRAQSSNVTTDPSEARVVNSIFNKWSISADQTQWNISGELCSGNAIDSTTSIDVPAYNPFIKCDCSFDNQTTCRITALKVYALDVVGEIPPELWTLTYLTNLKIGQNFLTGSLPPAIGNLSRMQYLSLEINALSGELPKELGNLTQLISLGFGSNNFSGSLPSELGKLVKLQQLYLDSSGISGPIPSSFASLKSLATVWASDTELSGSIPNFIGNWTMLQSLRFQGNSFEGPMPSSFSNLTSLTELRISGISNGSSSLEVVRNMKSLTILDLRNNNITGSIPSAIGGFQNLTLLDLSFNNISGQIPGSIFNLSSLSTLFLGNNNFSGSLPLQKSSSLRNIDLSYNDLSGSFPSWINEQNLQLNLVANNLTIENSNSSGLPTGLNCLQKNFPCNRGAGRYSDFAIKCGGPQITSTNGIVYQMDNDSLGPATYFVTDTDRWAVSNVGLFTGNSNPLFKSFVSNQFTNTLSPELFQTARLSASSLRYYGLGLENGFYNITLQFAETAILDSATWKSLGRRVFDIYIQGTRVLKDFDIQREAGGVSYRAVQKQFRFEVKENYLEIHLFWAGKGTCCIPTQGTYGPLIQAISATPDFIPTVSNKPPSSDKNRAGLIIGIVIGVGVVCFLSVFAIYYTIQRRKRLRDDEELLGIDTKPYTFSYSELKNATNDFNFQNKLGEGGFGPVYKGTLNDGSVIAVKQLSVGSHQGKSQFITEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGNVLSLNWSTRYDICLGVARGLAYLHEESRLRIVHRDVKASNILLDSELVPKISDFGLAKLYDDKMTHISTRVAGTVGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDTSLEGAKMYLLEWAWQLHENNCITDLVDPRLSKVDEDEVKRLVGIALLCTQTSPTLRPSMSRVVAMLSGDMEVSTVTSRPGYLTDWKFDDVTTSMTGFVMKVSDSSYYDSSASTSIVGGGDHFPNDPSKSILGETLSHGR*

Promoter(3k):

>AM01G012460.1
AGTTTCACTGGTACTATACAGTTTTCTTCTTTAAGTATTCATCTATATATTACTCTTAGGCTTTAGCTTGTTGAACTACCATGTTTCGTATGTTTTGTTGCTCTCTCATTGAATTTATTTAAGCACTGATTAAATTTCTTTGTAACTGTTATGTGAAAGATATAAAGACTTTTGAGGTACTTTTACGCACGTACGAAGTTCGAGAGGCGAAAATGGAAAGCTTACAAGAGAATGGCAGTGGCTCTAATGGGTCACTTCCTTGCAAGAGGAGGCAGTGTTCAGATGGAAGCAATGTGATCAGCAGTACTATATCTTCTGTTATGGCTAGACCATGTGGTGAGGCTAGAGGTCACACAGGTTATTTGACATTTGCAAGACTCAAATGTCTCTCATAGAGATAAAGATGAAGATGGTTATCATGTCATCTCTATTTTGTAGCTTAGAAAGGAGAGTCAAGACTCAAATGTCCTTGCAAGCCTTTGTAATTTTATGATCTATTTTTGTTTATTATTATTTTTTCATTTACAGCAATACTTTTTCAAAGAAATTTTGACATGTGCTTGGCGACAGATATTTTCTCATAAGCTTTATAAAATATATTTCTGTGACTCGTCATTTTATTTTGAAGTATGAGGGGGGATAGAGTCGTTTCATGTGCAACCATGTGTAAGGTCCTTAACAATTATAATCCCCAAATACATGGAGAAATTCTTGGTTGGATGTTGGCTATTTTAGAGCTTGTTTGTTTACTTTATTTTCATAGTAAAGAACATGATATCTAAAGCGGAGATTGATGGTCTAAGAAGAAATAATATATTTGGAAATAATGAAAACAACTTTGTAGCATTTTTCATCATTTCCAAATATGTTATTTTTTTGGCTATGTATAACATCTCACTTTGTATAGCATGTGCATATAATTGAAAATGGAAAATGAAATGAAAGGAGAACTCTACCATACCTATCGAGTTTTGATGGGTATAATATTACATAGGCAATATTAGAACAACCTATCGAGTTTTGATGGGTATAATATTACATAGGCAATATTAGAACAATATTTTAATTTATTGTAAAATATTTAAATATACAAAAATGATGTGTCATTGAGTGATTGCCTGTTGGGTGTCATACCCCACAAAACTCAATAGATATGAAAGTATGGTACTAAAGTATGGTACTTTAGTACCGTACTGTCGAAAAAATCAACAACTTTTTCTTCACTTCTCTTCAAAAGTGTCAACATATCAAACAACCATTCTACTAGATAACTTCAACATAACAAAGTGACATCCTTCACAAATTGGCTATGGAGGTTGTCAAGAAATCCTCCACAACAATCCTCCATGGTGCCGCCATGGCTGATATTTGTCGACTCGGATCCACATTGAGGTGCTCCACCGTGGAGTGGGCACGAGCAGTCGAGTCCTACGTCTGAATGTATGAATTAATTGGGTGAATGATATCTGATCGTACGCATAGTCCTACTCTGGTGATACCTACAATGACACTCCGACGCCCAAGTCAGTGGAATAAGAGTGTGAGCAGAGTAACGATATGGGTAAGAATACGTGTACCTGCCTTTTTATATAGTGTCAGAGGGGCAGTGCTGGCCGTTGGATCAGCGTGGTCGATCTCGACCATTGATCAAGCGAGCCTCAGCGAAGGTAGATCTAAGCCGTTGATCTTAGTGGATTTAGGTCATTATTTCTCCATCTCATTCGTGGGTCGGTCTCGGCCAGTCCTATATCGGATTGGGCCGAAGGCCCAGTCCAGAACAATGTCTAATGTCTTCTCCACTATATGATCGAAGCATGCACAACATCAGCAGAAGACTTCCATGAAGAAAATCGCATGTGTTGCTTCAGCAGCTATGTTTCCATAAAAAAATTTCTCCTATACTTTTAGGATTACAAGGTAAAGTTGGAAGAGACCATTAAGAAAATACATATGCTCAAAAAAATGAAAACTATGTTCCCTTCACACCGGATTGTTAACAAAGACGGTTCGGTTCACACAAGAGCAGCTGCGTCTGCAAGGACAACGACGTCAACACATCTCTCATAATCGGTCTGGTTCGCATTTCAAAGAACTTGGTTAGCATCTAACACAGGTGTCAAGATTTCAAGCCAAGGTCCTTCCTCCAGAATGACCTTAGCTTGGGGGCAACTGTTTTGGACTGGGTCTCGCCCCATAGAATTACTCCAGCCTAAACGATTCGGGGCCATGACCCAAAGGCCATGAATGGCCAAGATCAGTCCACCTTATCGTACGACCAAATATTACTCTAGGATTACACGCCTCACTGATAGAATATTGTCACGTCATTGGCACAACTCCCTATAAATACGCTGTCTCATTAATATGTCAGGTACACATTTTATTACTGTCTGCCATCTTTTCTCTGAGCTGACTTGAGCGTTAGAGTGTGTGCATGTATCACCCCTCACCGAATCAACGCAAATGAGCGCATTTGGGAACATCCCTTGGAGCAATCTCAGCATCATAGCTTGGTAGCATCTCGGCCTAGCTTCTTTTACTGAGACCGACTTCTAGTACAATTCACCTCTCCCTTAACAATTTGTACTTAACAAAAAAGAACTTTATTCGATTCTACATCTCAGGAAATTTCATTATGAAAAAGTCTCACCAAACATGAGATGGCTTTCCAAGAAGAAAGAGGGGATCTAAGAAACTTTACATCTCTAAAGCCTTGTAGATCATTTTTGACAAGGTTCCTTATTGGATCGCCAATTTGGAACATGACGTAAGCTTTTACATTGCATATTATTAAATCTGCTTATCATCACACTTGGGCATATATTTCATAGTTAATTAATACTTAATTAATATAACTAATGGTCAAAGACGCCAACTTTGGCTCTGTTTAGTAGTATTTATGCTACAAAATCAACGGGTCCTTTATTTTTTTTTCTTTTGTAAATTTGGTACTGCTTACTACTAACAAACTGGAAGATTATTATTGTGTGAAGATTCATC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	692	958	1.20E-47
PF00069.28	Pkinase	692	954	5.70E-46
PF11721.11	Malectin	425	610	1.20E-44
PF13855.9	LRR_8	290	349	6.40E-16
PF12799.10	LRR_4	289	326	1.70E-12

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.7.2:RLK-Pelle_DLSV

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0098542	defense response to other organism	Biological Process
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR021720	Malectin domain
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A072U125	_

SwissProt

SwissProt term	Description
Y1561_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g56130

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G56130	Leucine-rich repeat transmembrane protein kinase
Medicago sativa L.	MsG0880044284.01.T01	_
Oryza sativa L.	LOC_Os05g16824.1	SHR5-receptor-like kinase, putative, expressed
Cucumis sativus L.	Csa007370	_
Glycyrrhiza uralensis Fisch.	Glyur000310s00013619.4	_
Codonopsis lanceolata	Cl_chr04_12720T	_
Arachis hypogaea L.	AH07G24610.1	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 like

Expression pattern