Gene detail

Detail information of Am01G012180.1 Annotation

Gene ID	Annotation
Am01G012180.1	FTSH protease 12

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G012180.1	mRNA	Chr01	62495581	62515273	-

Sequences

CDS:

>Am01G012180.1
ATGGATTTCACAATTTCACAGAGACCAAACCCACTTCTTCTTTCCTCATCACCCCTAACCCCAATCTTTCAAAATCCAAACTTTAGAACCTTAACCGCTCCCCCCAAAGGCCGCAGAAAGCTCAGGCTTCGAGCTTCAAATACAGCAGACCCAAATGGCGCTGATGGGTCTTCTTGGTCACAGTCGTTGGAACGTGCTTCGAGGCGGTTCTTGGTGAAATTTGAAGAGACCGTGAAGAAGGAGATAGGTGTTGATTTGGAAGGTGGGTTTGTGAAAGCGGGTGAGTTTGTGGATATTGTGAAGAATAGTGGAAATGAGTTTGGAACAGTTGGAACTCGTTGGGTGTCTGAGTTTGTCGATTGGAACCGGTTGGAAAATTGGAAGAATGTCAAGAATTGGGAACCTAGGCGAATTGGTGCTTTAGTTCTGTATATATTTGTTATAGCATTTGCTTGTAGAGGAGCGTATGTAGCAATTCAAGCACCTTACCTAAATCGTCAGAAAAAGGAATTTACTGATGCTTACATGGAAACGTTAATTCCTGAGCCGTCCTCGAGTAATATTAGAAGATTTAAGAAGGGTATGTGGAGGAAGACAGTGCCAAAAGGCCTGAAAATGAAAAGGTTTATTGAAAGACCGGATGGCACACTTGTTCATGATACCGCTTATGTTGGAGAGGATGCATGGGATGATGATGAAGCTCACGAGGAACATGTAAAACAAATAATAGAGAATGATGAAAGGTTAAACAAAGAACAAAAGAGAGAACTAACCAAAGACCTTGGCATTTCAGGTGGTGTTCAAAGTGAGGGCACATGGCGTGAGAGACTTCATAAGTGGAGGGAAATACTTGGAAAAGAACGTCTTGTTGAGCAGTCAAATGCTTTAAATGCTAAATATGTAGTTGAGTTTGACATGAAAGAAGTTGAAAACAGTCTGCGTAAGGATGTGGCAGAAAAAGCGACAGCCACTCGGGGAACAAGGGGTCTGTGGATAGCTAAGAGATGGTGGCGCTATCGTCCTACACTTCCTTACAATTATTTTCTTGACAAACTTGATAGTTCTGAGGTAGCAGCTGTTGTCTTTACGGAAGACATGAAAAGATTGTACGTGACAATGAAAGAAGGTTTCCCGGTAGAATTTGTTGTTGATATCCCTCTTGATCCTTATCTTTTTGAGATCATTACAAGTTCTGGAGTTGAAGTGGATCTCCTACAGAAGCAACAGATCCATTATTTTATGAAGGTTGTAATTGCATTAGTACCTGGAATACTAATTCTCTGGTTTATAAGGGAGTCCGTGATGCTTCTACACATCACTTCCAGTCGTTTTCTTTACAAGAAGTATAATCAACTCTTTGATATGGCTCATGCTGAAAATTTCATTCTGCCAGTTGGAGATGTTGGTGAAACAAAATCTATGTCCAAAGAAGTTGTGTTGGGAGGTGATGTTTGGGACCTACTTGATGAGTTGATGATCTATATGAGAAATCCTATGCAGTTCTATGAAAGGGATGTGCAGTTTGTTCGGGGTGTTCTACTCTCTGGACCTCCAGGAACAGGAAAAACACTTTTCGCAAGGACGCTTGCAAAAGAAAGTGGACTGCCGTTTGTTTTTGCTTCGGGTGCTGAGTTCACAGATAGTGAAAAAAGTGGAGCTGCTAGGATCAATGAGATGTTTTCCCTTGCTAGGAGAAATGCACCTTGTTTTGTATTTGTGGATGAAATAGATGCCATTGCTGGAAGACACACTAGGAAGGATCCACGTAGAAGGGCAACTTTTGAGGCTCTTATTGCACAGCTTGACGGGGAGAAGGAAAAAACTGGTGTTGACCGTCTATCCCTCAGACAATCGGTCATATTTATCTGTGCCACAAATAGGCCAGATGAATTAGATCTTGAATTTGTTCGACCTGGACGAATTGATCGTCGTCTATACATTGGTTTGCCTGATGCAGGACAGAGAGTCCAAATTTTTGGTGTGCATAGTTTTGGAAAGAAACTTGCAGAGGATGTAGATTTCAAAAAGCTAGTATTCCGTACTGTTGGATTCTCTGGAGCAGATATAAGAAACCTTGTCAACGAAGCAGCAATAATGTCGGTGAGAAAAGGACATTCCAAAGTTTTCCAACAAGACATTGTTGATGTTCTTGATAAACAACTACTTGAGGGCATGGGTGTCCTTATCACTGAGGATGAGCAACAGAAGTGTGAAGAAAGAGTATCTTTTGAAAAGAAGAGACTGCTTGCTGTACATGAAGCTGGTCACATTGTGCTTGCTCACTTATTTCCTCGGTTTGACTGGCACGCATTTTCACAGCTCTTGCCTGGTGGTAAGGAAACTGCAATATCTGTTTTCTACCCTCGAGAAGATATGATAGACCAAGGTTATACAACATTTGGGTACATGAAGATGCAAATGGTAGTGGCTCATGGGGGTCGATGTGCGGAACGTGTTGTATTTGGTGATGATATTACTGATGGAGGAAAAGATGATCTAGAAAAGATAACAAAGATTGCTAGGGAGATGGTAATCAGCCCTCAAAATACAAGATTGGGGTTGTTAGCTTTAACAAAAAGGGTTGGCTTAGCTGATCGACCAGATGGTTCAGACGGCGATATGATAAGATATAGATGGGATGATCCTCAAGTAATTCCTACTAATATGCCAATAGAGGTGTCTGAGCTCTTCACACGGGAGTTGACAAGGTACATTGAAGAAACCGAAGAACTTGCCATGAATGCTTTGAGGAACAATAGCCATATTCTGGACTTGGTCGCAAGGGAACTATTGGAGAAGTCGAGAATAACTGGTTTGGAGGTTGAAGAAAAATTGAAAGGAGAGTCTCTGGTAATGTTTGAGGACTTTGTGAAGCCATTCCAAGTAAACATAGACGAGGAGGGACCACTTCCGCGTAATGATCGTTTACGGTATCAGCTACCGGACTTGTATCCTGCTCCTCTCCATAGATGTTGA

Protein:

>Am01G012180.1
MDFTISQRPNPLLLSSSPLTPIFQNPNFRTLTAPPKGRRKLRLRASNTADPNGADGSSWSQSLERASRRFLVKFEETVKKEIGVDLEGGFVKAGEFVDIVKNSGNEFGTVGTRWVSEFVDWNRLENWKNVKNWEPRRIGALVLYIFVIAFACRGAYVAIQAPYLNRQKKEFTDAYMETLIPEPSSSNIRRFKKGMWRKTVPKGLKMKRFIERPDGTLVHDTAYVGEDAWDDDEAHEEHVKQIIENDERLNKEQKRELTKDLGISGGVQSEGTWRERLHKWREILGKERLVEQSNALNAKYVVEFDMKEVENSLRKDVAEKATATRGTRGLWIAKRWWRYRPTLPYNYFLDKLDSSEVAAVVFTEDMKRLYVTMKEGFPVEFVVDIPLDPYLFEIITSSGVEVDLLQKQQIHYFMKVVIALVPGILILWFIRESVMLLHITSSRFLYKKYNQLFDMAHAENFILPVGDVGETKSMSKEVVLGGDVWDLLDELMIYMRNPMQFYERDVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSLARRNAPCFVFVDEIDAIAGRHTRKDPRRRATFEALIAQLDGEKEKTGVDRLSLRQSVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAGQRVQIFGVHSFGKKLAEDVDFKKLVFRTVGFSGADIRNLVNEAAIMSVRKGHSKVFQQDIVDVLDKQLLEGMGVLITEDEQQKCEERVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDMIDQGYTTFGYMKMQMVVAHGGRCAERVVFGDDITDGGKDDLEKITKIAREMVISPQNTRLGLLALTKRVGLADRPDGSDGDMIRYRWDDPQVIPTNMPIEVSELFTRELTRYIEETEELAMNALRNNSHILDLVARELLEKSRITGLEVEEKLKGESLVMFEDFVKPFQVNIDEEGPLPRNDRLRYQLPDLYPAPLHRC*

Promoter(3k):

>AM01G012180.1
TTGGGAGGGAATTATTGAACATCCTCCGATCAAAAATAGTTACTTTAGAAGGGATTAAAGTGAATATCTGTTTTTTTTTTAAAAAATAAAATAAAAAATAGTTGAATTAAAGAGTTTTATCTAGTCCCTCACTATTAATTGTTTTGACAATAAAAAATAGTCACTTTAGAAGTTATCATGAATATCTGTTTTTTGTTTAAAAAAATAAAATAAAAAATAGTTGAATTAAAGAGTTTTATCTAGTCCCTCACTATTAGTTGTTTTGACAATCAAAAATAGACACTTTAGAAGTTATCATGAATATCTGTTTTTTTTAAAAAGTAAAATAAAAAATAGTTGAATTAAAGAGTTTTATCTAGTCCCTCACTATTAGTTGTTTTGACAATTTCAGCGACATGAGAATGTCTGTAACATTTCCAGTATGCGTTGTCCTCACTTGCATGTTTTTCAGGAAACTTTTCAGAAGTTCACCCATCCCAAAATTGCTTCAAGTCAAGCATGCTTAACTATGAAGCTCTTATGTTCAGGGCTCCCGAAAAGATAATGCATTCGTTGGTATAAGTAACCTAAATCAATTCTTTTAAGCATTCATTCAACTGTACAGTCCCAGACCTGCACAACTTCATGATCCCTATCATTTCAGTGTGTATTCAGTTCATTCACACGCCCCTTTGCTGAAAGCTGCCAAGAGCCGCTCTTTCCTCAAGATCACTCCCCACCCTCGTCAGCCACAAATGTCACAATGTCGGCTCACCGGTGTGAGCGGTTGTATTGTGTGTGCGAGGTGTTTATTTGTCATTTCATTTAAGTAGACCAAAAAAATCTAGCCAACTTAATGTAGAAACCTTACAATAGTGCAAGAATTGGGGAAATGAAAAAGTTCTTCAAATTGATTAGATGAATATTAGGGTGTGTTTGGGAGGGAGTTTTAGGAGAGGAGTGGGAGGATTAATCTATATTTTTATGTGTGTGTGTGTAAAGTACATCCTCTATGCACAATTGTAGAGACTAATCTCTCGAGCTGGGTAGGACCCCAAATGACGACAAGGACCTCCCTCAAGAGTTTTAACGTTGTTGCATTCTTAAGGCTAGATTCGAACTCAAGACTTTGGTTAAGCTGGAAGAGACCCAAACCATCTTATTCAAGCACTCGTGGGTAGACTAGTCTATATTTTAATATAGGCTTAAATACAGTTTTGGTCCCCCTATTTTGACCAATCCACGATTTTGGTCCCTAAAGTTTTAATTTGACGATTTTGGTCCCCCTATTTTCCCAATTTGAAAAATCATAGTCCCCCACCCCAATTTTGACTCAGTTTGACTGAGTTATCCTACGTGGCAGCCCACGTGGACTGCCACGTAGGCGCACCCCCACCCCCCACACCCCCCACCCCCCCCACCCCCACCCCCCCACCCCCCACCCCTTCTTCTTCCTCGCTCTCCCTCCCCTCCCCCTTCACTGTTCCCCCTCCCCATCAGTCTCCCTCCCCCTTCACTGTTCCCCCTCCCCATCGGTCTCCCTCCCCCTTCACTGTTCCCCCTCCCCGTCGCTCTCGCTCTCCCTCCCCTCCCCGTCGCTCTCCCTCCCCTCCCCGTCGCTCTCGCTCCCCCTCCCCGTCGCTCTCGCTCTCCCTCCCCTCATCGGTCTCCCTCCCCTCCCCCTCCTTCGCAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTGCGCGAAGATCTCCCCTCCTCCTCTCTCTCTCCCCTCCTCCTCCTCTCTCTCTCTCCTCCTCCTCTCTCTCTCGCGTCGCTCTCGGTGAACCCCGTTGGGTTGGGGTGGGGTGGGATGGGGGTGGGGTGGGTGGTGGGGTGGTGGGTGGGGTGGGGTGGGGTCGGTGGTCGGGTGGGGTCGGTGGTGGGGGTGGGGTCGGTGGTGGTGGGGTGGGGGGGTGGGCTGGGGTGGGGGGGGGGGGGTGGGGTGGGGGGGTGTGCCTACGTGGCAGTCCACGTGGGCTGCCACGTAGGATAACTCAGTCAAACTGAGTCAAAATTGGGGTGGGGGACTATGATTTTTCAAATTGGGAAAATAGGGGGACCAAAATCGTCAAATTAAAACTTTAGGGACCAAAATCGTGGATTGGTCAAAATAGGGGGACCAAAACTGTATTTAAGCCTTTAATATATTTGAGATTTGAAAAAAATTAAAAGAATAGCTTGATAGATAATAATGTAACATTTTAAATCACACTTTATTTATGTTTAGAGACCTTTTATAGCTTTCTCAATTTTGAATTTAAAAATATGCCCTCCTCTCCGAAACATATCTAAGATTTGTAAACTTTGAAAGTCCAGTAAACATGACCAAGTCTTATAATAAAGTGGGGGGTTTGCAAAGAAGGCCAAATTAGTTGAGTATCGTACAATATCAGAAAGCTGATACTAACTAGTACAAGCTATGCATATGCATGGTCTTGATATTGTAATGTTTCCTCTATATTGTAATGTTCTTGATATTTCACCCTGATATCCTTCTAACTATCATTGCCTAGAAAAAGCATCGAGATCCTATGCTAGTCCCAAGGTTTTAACCTATATTCCAATTGTATTATGACTTATTACTTAAATGAAATGACAAGTTTTTGATGGTCACTTTTTCCCCACATATTCTCAAGAAAATAAGGATATTTTAATAGAATTAATTTATTTTTTTATGAAATCATTAATATTTAATGAATTCAACTAACTATTTTTTTTTGACAACTATTCAACTAACTATTTTAATACGTGTGAAGTTAGATTTTTTTTTTGTTTATAAATGAGTTTGGAGTAGTAGTATTAATTGATAATTAATTAATTAATAACAATATATTACTATGAAAAGAAGTGGTACATGGATAAACCCCGAACTCCTTCATCAACATAAACCCCGAAATCCCAACATCTTCAAAACGAACCAACAAGCTACTTCATGTAGAACCTGAAAATCCATCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00004.32	AAA	512	648	3.50E-33
PF01434.21	Peptidase_M41	741	942	1.70E-22
PF17862.4	AAA_lid_3	671	711	1.80E-11

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0045037	protein import into chloroplast stroma	Biological Process
GO:0031968	organelle outer membrane	Cellular Component
GO:0062091	Ycf2/FtsHi complex	Cellular Component
GO:0016464	chloroplast protein-transporting ATPase activity	Molecular Function
GO:0051301	cell division	Biological Process

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR037219	Peptidase M41-like
IPR000642	Peptidase M41
IPR003959	ATPase, AAA-type, core
IPR003593	AAA+ ATPase domain
IPR041569	AAA ATPase, AAA+ lid domain

trEMBL

trEMBL term	Description
A0A1S2Z760	_

SwissProt

SwissProt term	Description
FTSHC_ARATH	ATP-dependent zinc metalloprotease FTSH 12, chloroplastic

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G79560	FTSH protease 12
Medicago sativa L.	MsG0880044142.01.T01	_
Oryza sativa L.	LOC_Os06g51029.1	OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed
Cucumis sativus L.	Csa007672	_
Glycyrrhiza uralensis Fisch.	Glyur000196s00010875.1	_
Codonopsis lanceolata	Cl_chr04_51200T	_
Arachis hypogaea L.	AH07G21030.1	ATP-dependent zinc metalloprotease FTSH 12, chloroplastic like

Expression pattern