Gene detail

Detail information of Am01G010720.1 Annotation

Gene ID	Annotation
Am01G010720.1	Ribosomal protein S19e family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G010720.1	mRNA	Chr01	47850428	47852823	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G010720.1
GCCAACTCGTGCCTAGACAAAAATTTACACCTCTAGCCATTTTCTTTTCGACCTCACTCAAAAGATGAACATCCTTATTTGTTTCTACATTTTTATATTTCTCGTTATCTTGTTGATGAAAATACTCACCCATAAACTAGCGAGCATGTTAATGGAAGTTTAAAGTACTTGTACCCAATGTTTTTAAAATCGGACCGGAGATCGAACCGGCGAGACCTCCGGTTCATGGTTCAATCGGTTCAAGCGGTTCAACCATGGTTGAACCGGATAAGTAATTTATTAAATAAAAAATAAAAAATATTAAATTTTGGAGAAAAAAGTAAATTTAAAAATAAAAAATTGCATTTCGGGCGGTTCAACCCGGTTCGGTTCCCGGTTCTTTCCCGGTTCAAAGCGGTTCTTGGCGGTTCAATCCGGTTCTGGGCGGTTCTTTGGCCTGCGGTTCAAATGGGGTTGAACCAACCGGCCAGGGGTCCGGTTCCCGGTTTAACCGGTTGAACCGGCCGGTCCGGTCCGGTTTTTAAAACCTTGCTTGTACCTTTCGTCAGCTCGTTGATGAGCAATTTTGTCAACTTGTGATGAGAAGTGGGAACCCTCCTCGTCAACAAGATGACAAAAGGTAAGAATAGTATCAAAAATCTCCACTAACATGCCCATTCCCTAGTTGATGAAATTCCATTTTTTTCTAGCTTAACCAAGGTCTTGGGTTCAAATCTAATCTTGTGCATGCAGCAGTGTTAAATTTCTTGAGAGATTAGTCTCTGCAGTTGCGCACAGAGGATACACAATTTATACCAAAAAAATCGCTCGTTGATGAAAAATTTCATCAACTTGACGAGAGAGATTGAAAAAGGTAACAAGTTGAGGTGAAAGTTAGAAGTATTTTAGCATTTTCAAAGTAGAAGGGGAGGTCTTAAAATGTAAATGGAGGGGGTTAAAATAAAACAAGGTGAGTTTCGGTTTAAAAAAAGCCATCACTTTTCCCACACCCCTCCCTACTCACCCCACACCCCCTAACTCCTTTAATCCCCAAAATACCCTTCACTAAAAAACACTATTTCTCCCTCTCCCTCCCTCACACCTCCTCTCACACCCCAATCTAGAGTACTCCGCCTCCCTCTCCCTCCTCTCCCTCTCAATCGTTGATTTCGATTTCCCAACGTCAGTTTCGCACCTAGGTACTCCCTCCCTCACTTTCCTTCGTTAATTTTCATTGTTTTATGTTTCTGTTTCTGCGTTTTCTGGATTCTGAGTTGTCTGCGACAGATTCGGTTGCCCTCAACCGAATGGTTCTAGGGACGAAGCAAAACGGACCCATTCGGCTGAGGTCAACCGAATACGTTCGGTTGAGGTCAACCGAATCATACTGATACTGATTGTGTTTGATATGTTAGGTTGCAGGTATGATCCAATTCGTTACCCTCATTTAACGAAATGCTGGGAGGATTTCCATTCCCAATGAGATTTGGAGACTAGAGTTGCCTTGTTCCTTTTATTTTGTCTTGGGGCCATTGTATTCGTGGTGTCAACAACATGCGCTATGACAACATCCTTACTGATACGCATGCCATCTGCCAAGCGTATGGGGGTGTTGAGAGTGTGGAAGCCTCGTTAACATACTATCAGACCGGGAGCTTCAAGGTCGCCAGGATTATGCCCGCGGTTGCCTCTGATGGGAGTGTGAGTGACAATGATACTGCGAGTGATGCTGGATCCGGCTCTGTTGTTACCCAGTTGTAGTTTTTTACTTTTATTTTGTTTATCAATAATTGTAATTGAATGTCACTGATTTAGTAATGAATAAATATTGGGTTGATTATTTTTTGGTTTACAGTACCGTTTAAATTAAACAACAATTTTGTTATTAAAAAGCGTCACCGTACATAAAACTCGAAATACACGAAAATGATAAAATGACAAACTACTGAGCTGGTGGAGTTAAACGACTAAGGATCTCAGCGACGGTCTGTGTGGTTTCCACGTACAAATGCAGATAACCCTTCCATTTAAACATGACATAAATGGAAATCATTGCTTGGACGTCATCGTCGTTCTTGACATCCATTGTAGACCAGTGCACACGTCCATCATACCAATTAGGTTTCTGATAAACTATACGAGTTATCTCTCGCTTGTCGCCCTCCACTTGCACCTTACCCAGTAGTTTATCTTTTAGGGTAGCGAATGTTATGTTGTGTTTAAGCCTACACTGCATTGTGTCTCGCCCCTCGAAACAGACACCATCGACTTTGTTGGTGATAATGCTCTGATGATGAATGATAGTGAGGGAAGAATCCTCTGAGTATTGTGTTAGGGGCATTTTTTTTTGTGTTTATAAGATTTGGTGGAGAAGAAGCAGAGAATGGGTTAGGGTTTTTGTGAAGTAGAAGGGAAAGCTGAAGTCCAATTTATATTAGGCGTGGGGAAACATGAGCTTGCTCAAAATTTTAGATCACAAATCTGAGCCGTTTATTTTCTATCCTTTGGGGCACAATTTCCAAAGGAAATGCCATCCACTCTTTTTCCTGACACTTTTGACTGGTTGTGAGCCGTTGGTTAAAAGTGTCGGCGGAATCTGAGCCGTTCAATTTTTTTTAAAAAAAAACCTGTATTCGGCTGCCCTGTTCTGAATTTATTCGGTTGGGGTCAGCCGAATCCTCTAAAACAGGAAAAAAGGGGTGTGTGCCAAAAAATACACCTTCAATTGCCCATAACTGAATTATTTCGGTTGCCCGTAACCGAATTGGCAAAAAATACACGTTTGATTAATGGCCTTTTGGTCATTTCGCAAGATTAGGGGTGTGGGGTGAGCAATGAGAGGTGTGGGAAAAGTGATCGCATTAAAAAAAACCCCACCTGGCCCAAGTTTCTCTCTTCTTCCTCTACTTTATTAAACAAAGAAAATTTGAAACCCTAACCCTATTTGGCAGTGTGTTTGTTCACTCAATATAGCGGCGGCGAAAGCGTCACCACTTGCCATTACCATCATCAGCATTAGCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01090.22	Ribosomal_S19e	6	140	1.90E-56

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0022627	cytosolic small ribosomal subunit	Cellular Component
GO:0003735	structural constituent of ribosome	Molecular Function
GO:0003723	RNA binding	Molecular Function
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Molecular Function
GO:0006412	translation	Biological Process

InterPro

InterPro term	Description
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR018277	Ribosomal protein S19e, conserved site
IPR001266	Ribosomal protein S19e

trEMBL

trEMBL term	Description
I1JW21	_

SwissProt

SwissProt term	Description
RS191_ARATH	Small ribosomal subunit protein eS19z

KEGG

KO	Description	Enzyme
K02966	small subunit ribosomal protein S19e

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G02080	Ribosomal protein S19e family protein
Medicago sativa L.	MsG0380012073.01.T01	_
Oryza sativa L.	_	_
Cucumis sativus L.	Csa009663	_
Glycyrrhiza uralensis Fisch.	Glyur000824s00026005.1	_
Codonopsis lanceolata	Cl_chr02_63100T	_
Arachis hypogaea L.	AH14G41320.1	40S ribosomal protein S19-1 like

Expression pattern