Gene detail

Detail information of Am01G009500.1 Annotation

Gene ID	Annotation
Am01G009500.1	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G009500.1	mRNA	Chr01	39144354	39147495	-

Sequences

CDS:

>Am01G009500.1
ATGAGTGTTGTGTATACTCATCAATCACATAACTACTCTGAAATTGTTGCAAATAAGAACCCAGAAATGGAATCAAACTTTAGTGAATTACATTTACAACAACATTGTAACAACCAAAACAATTCTGGTTTATCAAGGTACCGTTCAGCTCCAAGTTCATTACTCACAAGCCTTATAGACACAACAACATCAACAACAACAAACATTGACTATGTCAATGAAGAAACTTTCACAAGTGAAGATGAATCTTCAGATATGGAAACCATGTTGGCAAGTTTGACCAATTCACAAGAATTTGAAGGTAAATCAATGAAACAAGAAATAGGTGACTTTGTTTCAAAGGGACTACAACAACATAATCATAATAATGGTTACTCTTATGGGATTTCACCACCTCAGATAATTTACCAACAACCTCAGCAAATTCAAAGCTTGTCAAATAGTTTTGATGGTTCATTCTATGCAATGAATCTTGCTTCAGAGAATGGTACTAAAATTGGTTCTTTTTCAACTAATTGCAACAATCTCATTAAACAAAAGAGTTCCCCAGCTGGCTTTTTCTCCAATTATTCTGTTCATAATGCACTGAGAGAGGTAAGAAGTTTTAGAAGCTGTGATGTATCAAATGGACAAGCTACTACATCAACTAGTGGATTGCATGCTACTTTGAATTTCTCATCAAGCCCATCACAGATTGCTAAGTTTGAACATGAATCCCTTCAAGCAAATTGTGTTGAAAATGAAAACATAGGAAATGATAATGGCAGCACTAAGTGTTACATGCCTAGCTTCACCAATGACTTCTGGGATGGTTCTGCAATCAATGCCTCCAAAACAGCTAGAAACAATAATGAAATCATGTTTTCCACTTCAAATGATTTGGAAACTCAGGATTCAGACTTTGGATATCAAAAAATGGGTTTGAGCCATCATTTGAGTTTGCCTAGCTCTTCTACCAAGTATTTACATATACAAGAATCTACTCCATGCAAAATTCGTGCTAAAAGAGGCTTTGCTACTCATCCAAGAAGCATTGCAGAGAGGGAAAGAAGAATACGAATTAGTGCAAGAATTAGAAAACTGCAAGACCTTTTCCCAAAATCAGATAAGCCAACAAGCACAGCAGATATGTTGGATTTGGCAGTTGATTACATTAAAGACTTGAGGAAACAAGTCAAGACACTAACAGAAACTAAAACAAACTGCATTTGTAGAAGCCATACTCAGAGCTAG

Protein:

Promoter(3k):

>AM01G009500.1
ACAGACCCATCCAACGACCCAGGCTCAATCGAGGAAAGGCGCAACCCTTTCTCCGTGTCTATAAATACAACGCCACCCTGTAAAATTAGGTACGCTCTCTAATAAGTACCTCTCCTTCACTTCTGACTGCTGACTTTGGCATCAGAGTGTTTGCAGGTACACACCAACCATCCGACCTCAAGCTCGGGAGGGGACGACTTCAACCAACCTCTACCAACTGCAACCTCGATCCCCGATCCCGGAAGCAAGGTACATAACACTAATTGTGTATGGTTAGGGCCTTCGCCCTTTGATATGAATCATACTCATATCGACCAAAAAAGAAAAGAAAAGCCTAGACCGAGGATTATTTCCAGTGTTGTGAATGGCTTTGTAAGCTAAACTGGTGGAGAATCACCCATCAAAGCTAGCTCTCCATACAAACTCATCATCTGGCTGGATCACTGAAGGAGTGGGGCTGAGCCAATTTGTTCCACAAATTGAGGCTCTAAATGCTACTGAAGCGTGCCACGGTCCATCTCATATCTGCCGTTGTGAACTCGCTAACTGTTGCCTCCATGAAAATATTAGTTTTGAAATAATTTTAATTTATTTACACAATAGGTGTATAAGTGTTTTACACCATCTATCAATTACAAGTTGACACGTCATTACAAAGAAGTTAGTCAAATAGTAATCACGTTGTATGTCAATCATACTATGACTTGTTATTAGTTATGATTGTAAAACAAGTTTCACCGATAGTGCGTAGCAATTAAACTCTTTTTAAAAATGAAGAATTTGTCTTACACCTTAAAGAGGGTATGATTGGATAGAGGGTTTAGGAGGAGAGGGGAGGACTTAAATTTTTTGTTTTGGTTACGACATGCTTAGGAGGGCTTAATTTTTAATTCTAAATTGAGTGAAGCTTTATAATGTTTCTAAACAAAAATGAAGTGGGATTAACAATATTTTATCATTGTCTATCATGTTATTCTTTCGATTTTTTAAAATTTCAGTGAAGTATTAAAACATAGACTAAGTCTTCTAAAGCCCTCCCTTCTAAACCCTCCTAAATTAATCACCCTCATAAACATACCTTTAGACTGCTACAATCTATTGAACGAGACTCGGTTATTTATTTTCTTAACTTTTTCTAAAATAATCTTTTCAAGCTGATTATCCTAACTGAGTGCGCACTGTACAGCTTTCGCAGACAACATAGACCTGCTTTATTTTAATTGAGAAATGTCCTCGCGTGGATAAATAATACCCACTCTTGATATTTTAATACAGTGTGAAAACAATATATTTAACCTAACTGAAAGGAAAGGAGGCTTCTGAATCCTGATCCTCATGAATTACATTTTTGTGACTTAAAATATATTATTTTGAGTTTTTCTTTCCTAGGATAAAATGAACAAGTCTTTGTTTCGTTCACATTTGTACAAAGTGGAATAGCAAAGGAATACAAGCAATATAGACCAGATTGAATGGATGAAAACAGTTGCCACCTCGGATTTGTTTGTCCATTCTGGGAAGAATTTCTTGGTCAAGTCACCTTGTTGTTTTGTTAAAGATATATGAAATTTGAAAAGGATTATTACTAAAAATTAAACAATAGAACTAGTTAGGATATGATGGAAAAAAGTAAGGTTAAAAGTGGTTGCCCCATCCAGCAACCAAAGAACATCAAAGGATTATTCCTTAATCCCATAAACCAGGTGAAAAAATAGTGTAATTTAATGCACTGTTCCATTCAGTAAGTATTAGTTCAGCCACTTTGCGAACAAGGGAAATGATAATAATGCACTCTTTTAGAAGCACAGTAATATATTTTAAAAATGGTATTGTAAATATTAATTTGTCTTCATAGAGGATGTTTGTCTCAAAAACAGTGTGGATAAAAGAAAAGAAATAAAGTAAAGATGGAGCCATTGCTTTTTTTAGGGATTAAAAGTTTTAGTGTGATGGGATGTCACCCGGTCAAAGAAGGGAAAGTTTTTTGGACTCTTTGAACATTTACGAATACATTTACCTCATCACCCCAAAGAAACTAGATAGAGCCATTGTTTTGAAACATGAACAGGTGACCGACTTAGTGATGAGATCGGGTCACTAGTCAAATCGATGGATGAGTAATTGCATCGGATAAACTGATATAAGAAAATTGTTAACATCCAAAAATTGTTAGAGTTGCTGGCCGAGGAAGGCCTCAGCCGAGGTGAGTGCTTAGCCGGGTATACAGGGCTGATTTGCTTAAATTGTTAGCAAGAAGCCAGAAGGCTATACAATGGCCTATATTTCTCCTACTCCTTTTGTATCTGCAACGTTGATGCCCAAATCATTGATTGAATCTGCAATTGATCGAAATTTTTTTATAGGCAATGTTAGTGGGGGAGGGGGAATGTTAGTTTCCCGGGTTTGAACCCGGGACCTCCTTCTTGCACTCTTTTGGTACACTCCTTCGATATCCCTTAGCTCGACAACTGAGCTACCTACTTGGGATCAATAGATCGAAGTTGACCTGTAAATCTGAACCATATGAACACCGCAACCTGACGAGAAAACAAACAACGTCACACCAAGATGACGAACAAAATAACGCCGCACTCGGAAGGCGAAAACATAAAAAATTCAAAAAAATACTAGATCTATGTGGTAGCCTCTTATTTAGTTGAAAAAAGAGAAAGAAATTGATGTGCAGGGTTCTTTCTAGGCCAAAAAATACCCAAAATCACCCTTGGCCATAACCGATCATATTAATGACTCAAATTGGTTTGAGCAGTTTTTTAAAACTATGGAGGGCCCATTTACTTTCTAGGGGTATTTTCGTTATAATGGTAAAACATAAGGGCAATCATTGAACAACCCAATATATAAATATCCCCCATGGCAAGACAAAACTCTAAACTTTCTTCCCAACAACACAACTCTTCTATTCTTCTTAATCCTGTGTCTAAATTTTAAGCTCTGATCCAAACCTACAAAGCTTAACTAAGCACCTTATAACTTGTAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00010.29	HLH	344	388	6.70E-10

Gene family

Gene family	Subfamily
Transcription Factors Family	bHLH

Gene Ontology

GO term	Description	Category
GO:0046983	protein dimerization activity	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638	Helix-loop-helix DNA-binding domain superfamily

trEMBL

trEMBL term	Description
A0AAN9QMF8	_

SwissProt

SwissProt term	Description
BH130_ARATH	Transcription factor bHLH130

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G42280	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Medicago sativa L.	MsG0880043481.01.T01	_
Oryza sativa L.	LOC_Os08g39630.1	helix-loop-helix DNA-binding domain containing protein, expressed
Cucumis sativus L.	Csa001925	_
Glycyrrhiza uralensis Fisch.	Glyur000040s00007396.1	_
Codonopsis lanceolata	Cl_chr08_18760T	_
Arachis hypogaea L.	AH08G25020.1	Transcription factor bHLH130 like

Expression pattern