Detail information of Am01G008040.1 Annotation
Gene IDAnnotation
Am01G008040.1 Ribosomal protein S21e
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G008040.1mRNAChr013167908031681395-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF01249.21Ribosomal_S21e1767.40E-37
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0022627cytosolic small ribosomal subunitCellular Component
GO:0003735structural constituent of ribosomeMolecular Function
GO:0000447endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Biological Process
GO:0005791rough endoplasmic reticulumCellular Component
GO:0006412translationBiological Process

InterPro
InterPro termDescription
IPR018279Ribosomal protein S21e, conserved site
IPR038579Ribosomal protein S21e superfamily
IPR001931Ribosomal protein S21e

trEMBL
trEMBL termDescription
A0A9D5BMP1 _

SwissProt
SwissProt termDescription
RS212_ARATHSmall ribosomal subunit protein eS21y

KEGG
KODescriptionEnzyme
K02971small subunit ribosomal protein S21e

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G27700 Ribosomal protein S21e
Medicago sativa L.MsG0780039633.01.T01 _
Oryza sativa L.LOC_Os03g46490.140S ribosomal protein S21, putative, expressed
Cucumis sativus L.Csa011705 _
Glycyrrhiza uralensis Fisch.Glyur000227s00015140.2 _
Codonopsis lanceolataCl_chr05_11140T _
Arachis hypogaea L.AH14G39260.140S ribosomal protein S21-2 like

Expression pattern