Gene detail

Detail information of Am01G006090.1 Annotation

Gene ID	Annotation
Am01G006090.1	myb domain protein 111

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G006090.1	mRNA	Chr01	23311288	23312876	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G006090.1
GCGTGTATGATCGGTTATATCCGGGAAGAGCGTTTTCGAAGGAAACTTTTGTAAATGGGGTTGAAGAGTTTATTAGGGTAGCATGACAACATGATTTAACTAAAGAGGAAGGGGGCATTAGATGTCCATGCCTTAAATGCAAGGGTGTACCTATTAGTACTGATGATAAAGTCAGGGAGCACTTATGTCATATCGGGTTTATGCCTAATTATTGGATTTGGGTGGACCATGGAGAACAACTTCCGAATTTTCACGTAGGGTGTACCTATTACTATTGATTGGGATTTTATTGTTGATTCAGATGTTAAACTTGTTGATTCAGATTTTATTGTTGATTCGGATTTTAGTATTTATAATTATTATAGCAGGTTATTATAAATATAAAAAAAACAGGTTTTTTTTAAAAAAAAAATTCAGGGGTCATTAGCGACGAAAATCCATCGGTAATTAGTATGGGAAAAATTGGACATGTGGCATATTGTAGCGACGGATTTTGTGACGAATTTCCCTCGCTAATTTTGGTGAATTAGATGACGACACATGGTTGTCATTAGTGACAGATTTAGCTAGTGAAATATACCTCTCTAATTAGCGACGGATTTAAACTCCGTCGCTAAACATTAGCGTGAAGGTTTTTAGCAAGGGAACCATTCTGTCGCTAAATCCGTCGCTAATTGCTGTTAATGAGGGAAAAATAACAGTTAGCGAGAGAAAAATCTGTCGCTAATTCCCTGTTTTTTTTGTAGTGTAAATGGATTATACCATATGTAGTTAATAAGACTAGTAATTGCTAAAAATGGTAATCAGAAGTAAAAGACACGATTAAACCATGACATTATCTTAAATAAAGTATAAAATGGGGGGAAAGGAACCTGCAAATCAGACATGCAGAAGACCAAAATATAAAACGAAAACAAAAACCCAACAAATCAAAGCAAATAAACATGCAAAAATTATATCACACAAAATTCTAAAAAATAAATAAAATAAAATTATAAAAACAAATTAAAGTAACCAACTAGACATACGAATTTCCACTAAAATAACAAACATTTAAAAAATTTGTCAAATAAATAACCGCTAAAAAACAATAAAAACATAACAGAACATAAAAATTAATAAAAATAAAACCAAAGCCCGGCCCAAATGGAAGCGAAAATATCCAAAGAGCAAAATAAAAAGCTGAGAAAGAAAAACAGGGGGGAGGGGGGGGGGGACCCTAGATTTATTATATAGATCAAAAATGTAAATATCTCGTAGATAACATTACAACCAATCAGCTAACAACAGTTGGTTCCGGTTGATCTATGTAGACGATGATTTAATTACTTTTTTATTAATAGATAATTGCAATTAATAAATGATTAGTAGAGTATCTCTTTACCTTATTTTTGCGACAGTATACTTTAAACCTTTTAAGTAGAAATCAAAATATATAGTACCAAGAAGTAAATCCAACCAAAATTTTGATATTTAAATATTTAAACTAGTACTTTACTATAAACCTATAAATATTTAAACCGTATTTGTTATAATTTGTTTTGAACTTATAAATAATTTGTAAGTTGTAAAATTTAATAATAGAAAAAGGAGAAAGTCGATAAAAGACTATATTTCAACTTGCTTAAAACCCGTGTTGCAAAAAGTTAAAAAAAAGTCAGTATCTTCATCTAATTTTTATAATGGAGTAAAAATCAGAAAAAATAAAAAGAGATCTAATATAAGATATGCACCCCGTTTGCCGCTCTCTTTGATGCCACTCCCGGGAGCGGCAATGGGAACGCCAACATAAGATATTAGTCATTAAGTTTTCTTGTTTTTTAGATAGTAGGTTTGTTGTAGTAGTCTTCAAAAAATTTAATTATCAATGACAAATATTAATCTCATGTTTTTTTATACATCAATGCAGTTATCCCGTGTTTTTTATATATTAGTGCAATTATCTCGTAATTTCAATTGATTATTTAAGTTGAATAGTAGATAGTAAAAGAGAGATAGTAGATTATCAATAAAAAATATTTATTTTAAATATTAATCAGTTGTTTAAATAGTCATTATATATTTTTGTTTCTTAGATAGTAGGTTTATAGTAGTTTTCAAAAATTTTAATTATCAATGACAGTTTTTTTTTATATATCCTTGCAGTTATCTTGTAGTTTCAATTGATTATTTTAGTTGATTAGTAGATTATAGTAGATAGTAAAAGATAAATAGTAGACTATTAATAAGAGTATAAACAGATTTCGGAGAGAAAAATTAAAATTTTAAGGTGATAACTTTCTCCAAAATGGTGCAAGTTTTTTTTTAGTGTGACTCATTTATATTTTTATATGTAACTTTAGTAGAGTAGTGTTTGTATAAATTTAGAAATTTAGTTAAAAAAACTAAAGTGAAGTGATAAGAGAAAAATAAAAATTGTTTATGGAAAAAGTAAAAGTAAAGTAAAAAGAAAAAGGAAGAAAGAGAGTGTAAGAAGAAAAAGAAAGAAAGATATGGTAATGACATTTTTACCCTTAAATTAGACATGTGTCTTGTTAATAAGAGATTCAAATTGGTAATTTCATAAGAGACTTGTTTATATAAATTTGTATAAATAGATATTAGATTAGATTACTATCGAGTATCGATTGATATTGATCGATGATATTTTTTAAAAAATTATTATATATGTAGATGACTGTAGATAAAATAGCAGCCACCTCTATCTATTTGCTGGCGTTCACTTTGTCCTTGTCTATAGCATAAGGATATCAAAATTATTATTACCAACCCAAAAAAAATAAAGCAGCCACTTTCACCTGTCCTTGTCCGAGGCATGAAAATATTAAAATTAAAATAATAATTAAAGTGGCTGCTCTCCTACCTATAAATGGAATCAAGATGTAGGGATCTTTAGGTGCTCTCTGCTTCCTGTAGAGGTTAGAGAACCCTTCTATAATTAACTCTTTTCAACACTTTTCAAGTTAGATCGTTCTAATTTTTTAAGTGTGCATAAAAAAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	7.60E-31
PF00249.34	Myb_DNA-binding	67	112	7.60E-31
PF13921.9	Myb_DNA-bind_6	17	76	1.50E-19
PF13921.9	Myb_DNA-bind_6	71	119	1.50E-19

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0000976	transcription cis-regulatory region binding	Molecular Function
GO:0010597	green leaf volatile biosynthetic process	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0030154	cell differentiation	Biological Process
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A9D5AXA2	_

SwissProt

SwissProt term	Description
MYB08_ANTMA	Myb-related protein 308

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G49330	myb domain protein 111
Medicago sativa L.	MsG0780041774.01.T01	_
Oryza sativa L.	LOC_Os04g43680.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa012797	_
Glycyrrhiza uralensis Fisch.	Glyur000211s00017646.1	_
Codonopsis lanceolata	Cl_chr04_48870T	_
Arachis hypogaea L.	AH12G03980.1	Transcription factor MYB3 like

Expression pattern