Gene detail

Detail information of Am01G004030.1 Annotation

Gene ID	Annotation
Am01G004030.1	multidrug resistance-associated protein 9

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G004030.1	mRNA	Chr01	13428228	13437061	-

Sequences

CDS:

>Am01G004030.1
ATGATGTCTTTGGAGAACTTCAACAATATAATATCTGGTTTAACAAACCTCAGAATTCTGTCATGGACTGCATGGAAGCCATTAGACTCACCATGCATGTTGGAGCATGTAATTCTACCAATAGAACTTGGTTTCCTTCTGATATTATTACTCCAACTCCTAAGAAATTGCATGAACCGGATAACCAAGCAAAACAAGGTCTCAGATTGTTCCTCAGATGTCGTCCACACTGCAATCAAGTTTGGTTTTTCTTACAAACTCAGCTTAATTTGCAGCACTATAATGTTAGCTGTTCATGCCTTAATGTTACTACTAATGCTCAATAATAATGAGACTCAATGCACTTCTAAACCTAAAGCTTTTACATCAGAGATAACTCAAATATTGTCATGGACAATTAGTCTAATAACAATATGGAAAATGTCAAAAAAATCAAATGCTCGTTTTCCTTGGATTTTAAGAGCATGGTGGTTTTGTAGTTTCCTTTTGAGCATTATAAGCACTACCCTTCATGTCAATTTCAGTTTCACCAACAAGGGTAAAATTGGTATAAGAGAATATGCAGATTTCCTTGGTTTGTTTGCTTCATCATGTCTTGTAGTTATTTCAACAAGAGGGAAGACAGGAATTGTCTTAATTGCTAAAGATGGTATATCTGAACCACTTCTTGGAGAGAAGGAGAAAACTGAGAAGCATTATTATAAGGAATCTCCTTATGGAAAAGCTACTCTTATTCAACTCATTAACTTCTCTTGGCTCAATCCATTATTTGCAGTAGGTTATAAAAAACCTCTTCAACTGAATGATATTCCTGATGTTGATATCAAAGATTCTGCTGAATTTCTTAACAATTCCTTTAATGAGAGTCTTAAACAAGTTAAGGAGAAAGATGGAACTACAAATCCATCTATCACTAAGGCAATATATTTGTTTGCTAGGAAGAAAGCAGCAATCAACGCGCTTTTCGCGGTAGTTAATGCTTCGGCTTCATATGTTGGTCCTTACTTGATCACTGACTTTGTGGATTTTCTCAGCGGGAAGGGAAACCACGGATTGAAGACTGGATACCTTCTGTCACTAGCCTTTTTATGTGCTAAAATGATTGAGACAATAGCTCAAAGGCAATGGATATTCGGTGCGCGACAATTAGGCCTTCGACTTAGAGCAGCTTTGATATCTCATATATATAAGAAGGGTTTATGTTTGTCTAGCAGATCGCGACAAAGTCATTCGGGCGGTGAGATCATGAACTATATGAGTGTAGATGTGCAGCGAATTACGGATTTCGTTTGGTACGTAAATGTTATATGGATGTTGCCTATCCAAATTTCACTAGCTGTTTTCATTTTGCATACAAATCTTGGATTAGGTTCATTAGCTGCATTAGCTGCTACATTAGGAGTTATGACTTTGAACATACCTCTAACAAAAATACAAAAAAGATACCAAACAAAAATCATGGATGCTAAGGATAACAGAATGAAAGCTACTTCAGAAGTTCTTAAGAACATGAAGACATTGAAACTTCAAGCATGGGATAGTCAATTTTTTCAAAGGATAGAAGCATTAAGGAAAGTTGAATATGATTGGTTATCAAAGTCATTAAGACAAGCAGCATTTTCAGCTTTTATCTTTTGGGGATCACCAACATTCATTTCTGTGATAACCTTTTGGGCATGTATGTTCATGGGAATTGAACTAACAGCTGGAAGGGTATTATCCGCATTCGCCACGTTTCGGATGTTACAAGACCCTATATTTAGTCTACCTGATTTGCTCAATGTCATTGCTCAAGGAAAAGTTTCTGTTGATAGGATTGCTTCTTTCCTAAGAAAAGAAGAAATTCAACATGATGTTATTGAAAATGTAGCAAAGGAGAAAACAGAATTTGATGTAGTTATTGAAAAGGGTAGATTCAGTTGGGATACTGAGTCAATAACTCCAACACTTGATGAAATTGAGTTGAAAATTAAGAGAGGAATGAAGGTGGCAATTTGCGGATCGGTCGGTTCGGGGAAATCTAGTATGCTGTCAGGAATTTTAGGAGAGATATATAAGAAATCTGGAACAGTTAAGATTAGTGGAACAAAGGCTTATGTTCCACAATCAGCATGGATTTTAACTGGAAATATCAGAGACAATATAACTTTTGGAAAAGAGTATAATGATGAAAAGTATGATAAAACTGTTGAAGCATGTGCATTGAAAAAGGATTTTGAGCTTTTTTCATGTGGTGATCTTACTGAGATTGGTGAAAGAGGGATTAATATGAGTGGAGGACAGAAGCAAAGGATACAGATCGCTCGCGCGGTTTATCAGGATTCTGATATTTATCTTTTTGATGATCCTTTCAGTGCTGTTGATGCTCATACTGGTACACATCTCTTTAAGGAATGCCTTATGGGGATTCTTAAAGAGAAAACTATACTTTTTGTTACACATCAAGTGGAATTTCTTCCAGCAGCAGACCTGATTCTGGTGATGCAAAATGGAAGGATAGCACAAGCTGGAACATTTGAAGAACTTCTAAAGCAGAATATAGGATTTGAAGTATTAGTTGGTGCTCACAGCAAAGCTCTAGAATCAGTTTTTATGGTTGAAAATTCAAGTAAAACAAATTCATCTCAAGAGACAGTTCTTATGGTTGATAATTCAAGTAGAGCAAATATAGATCCAACAGCTGAAGGAGAATCCATAACTACCTCAAACTCAAGTGCTGAACTTCCAATCCCAAACCTTGAAGATAAACCTTCAGATGGAAAATTGGTTCAAGAAGAAGAAAGAGAAACAGGAAGTATATCAAATGAAGTTTATTGGTCTTATTTGACAACTGTTAAAGGGGGATTACTTGTTCCAATCATAATATTGGCACAAACTTCATTTCAAATACTTCAGATTGCTAGTAATTATTGGATGGCTTGGGTTTGTCCTACAACAACTAATGCTAAGCCTATATTTGAGATGAATTTCATATTACTTATTTATATGGCACTTTCTGTTGCTGGTTCACTTTGTGTTCTGTTGAGAGCTATGTTGGTTTTAAATGCTGGACTTTGGACGGCACAAACTCTTTTCACAAGAATGTTGAATAATGTGCTCAGAGCCCCTATGTCATTTTTTGATTCAACTCCAACTGGAAGAATCTTCAATAGGGCTTCCACAGATCAAAGTGTGCTAGATATGGAAATGGCAAACAAAATAGGATGGTGTGCTTTCTCAATAATACAGATTCTAGGCACTATTGCAGTAATGTCTCAGGTGGCATGGCAAGTATTTGCAATCTTCATTCCAGTAACTGGAGTCTGCATATGGTATCAACGATATTACACGCCAACAGCAAGAGAACTCGCTCGCTTAGCACAGATACAAATAACTCCAATTCTCCACCATTTTTCAGAATCTTTAGCAGGAGCAGCATCCATACGAGCCTTTGATCAAGAAGACCGTTTCACGCGCACAAATCTTGTCCTTGTTGATGGTTTCTCAAAGCCATGGTTTCACAATGTGTCTGCAATGGAATGGCTTTCTTTCAGACTGAATTTGCTTTCAAATTTTGTTTTTGCCTTTTCATTGGTCTTGCTAGTGAGCCTCCCTGAAGGATTTATCAATCCAAGCATTGCAGGGTTGGCAGTAACATATGGAATCAATCTAAATGTCTTGCAAGCTTCAGTTATATGGAACATTTGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTACAATACACAAATATAGCAAGTGAAGCACCTCTTGTAATTGAAGACTCCCGGCCACCAAGCAACTGGCCAGAAACCGGAACAATATGTTTCGAAAATTTACAGATACGTTATGCTGAACATCTACCATCTGTGTTGAAAAACATAACCTGCACATTTCCTGGAAGGAAGAAAGTCGGTGTCGTAGGACGAACCGGCAGCGGAAAATCAACTCTCATTCAAGCCCTTTTCAGGGTTGTTGAACCAAGAGAAGGAAGCATTATAATTGATAATGTTGATATATGTAAGATAGGTCTTCATGATTTAAGATCAAGGCTCAGCATTATCCCACAAGATCCATCCTTGTTTGAAGGCACAGTTAGAGGAAATCTGGACCCTTTGGAGCATTACTCTGACATTGAAGTCTGGGAGGCTCTAGATAAATGTCAGCTTGGTCATCTGGTGAGGGCCAAGGAAGAGAAGTTGGACTCCCCAGTGGTTGAAAATGGTGATAACTGGAGTGCGGGACAAAGGCAATTATTTTGCCTTGGAAGAGCCTTGCTGAAGAAAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCAGTAGATTCTGCAACTGATGGGGTCATACAAGATATCATCAGCCAAGAGTTCAAAGATCGAACCGTTGTCACAATAGCTCATCGAATCCACACCGTTATCGATAGCGATTTGGTTTTGGTGCTCAGTGATGGGAGAGTTGCAGAATATGATGAACCATCAAAGTTACTTGAGAGAGAAGATTCATTCTTCTACAAACTGATAAGGGAGTATTCAAACAGATCTCATAGCTTCAACAGCTTGGCAACTCAACATGTCCAAAACAAGCAACAATTCTAA

Protein:

>Am01G004030.1
MMSLENFNNIISGLTNLRILSWTAWKPLDSPCMLEHVILPIELGFLLILLLQLLRNCMNRITKQNKVSDCSSDVVHTAIKFGFSYKLSLICSTIMLAVHALMLLLMLNNNETQCTSKPKAFTSEITQILSWTISLITIWKMSKKSNARFPWILRAWWFCSFLLSIISTTLHVNFSFTNKGKIGIREYADFLGLFASSCLVVISTRGKTGIVLIAKDGISEPLLGEKEKTEKHYYKESPYGKATLIQLINFSWLNPLFAVGYKKPLQLNDIPDVDIKDSAEFLNNSFNESLKQVKEKDGTTNPSITKAIYLFARKKAAINALFAVVNASASYVGPYLITDFVDFLSGKGNHGLKTGYLLSLAFLCAKMIETIAQRQWIFGARQLGLRLRAALISHIYKKGLCLSSRSRQSHSGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVFILHTNLGLGSLAALAATLGVMTLNIPLTKIQKRYQTKIMDAKDNRMKATSEVLKNMKTLKLQAWDSQFFQRIEALRKVEYDWLSKSLRQAAFSAFIFWGSPTFISVITFWACMFMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLRKEEIQHDVIENVAKEKTEFDVVIEKGRFSWDTESITPTLDEIELKIKRGMKVAICGSVGSGKSSMLSGILGEIYKKSGTVKISGTKAYVPQSAWILTGNIRDNITFGKEYNDEKYDKTVEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDSDIYLFDDPFSAVDAHTGTHLFKECLMGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQAGTFEELLKQNIGFEVLVGAHSKALESVFMVENSSKTNSSQETVLMVDNSSRANIDPTAEGESITTSNSSAELPIPNLEDKPSDGKLVQEEERETGSISNEVYWSYLTTVKGGLLVPIIILAQTSFQILQIASNYWMAWVCPTTTNAKPIFEMNFILLIYMALSVAGSLCVLLRAMLVLNAGLWTAQTLFTRMLNNVLRAPMSFFDSTPTGRIFNRASTDQSVLDMEMANKIGWCAFSIIQILGTIAVMSQVAWQVFAIFIPVTGVCIWYQRYYTPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEDRFTRTNLVLVDGFSKPWFHNVSAMEWLSFRLNLLSNFVFAFSLVLLVSLPEGFINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNIASEAPLVIEDSRPPSNWPETGTICFENLQIRYAEHLPSVLKNITCTFPGRKKVGVVGRTGSGKSTLIQALFRVVEPREGSIIIDNVDICKIGLHDLRSRLSIIPQDPSLFEGTVRGNLDPLEHYSDIEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRVAEYDEPSKLLEREDSFFYKLIREYSNRSHSFNSLATQHVQNKQQF*

Promoter(3k):

>AM01G004030.1
TCCTCACAAGGGACGTGTCTATATATGACGCAAATTACGGCGAGTCGGTAAACATCCCCGTGCAATCTTCCACAATAGAATCTTCACTTTTTGAGGGATTTTCAGCTTCCAAATACTCATCCAATTCCCCGGTACCCGTAGGTGGCTACTATCAATAAGATCCTCCATCACACCAAAATAAGCAGACCGGACCGAGTAAATACCATTGCGACTTCTCCACCATACCAACTTGTCTTCACCTTGAGCATTGTAAATAGGCATCTTCTTGATTAAATGAGCTTCCTGATTGTTGAAAATTGTATCTACCAAAAACTCATTCCAGCTACTTTGTTGAGCATTGTATTATTTTATGAGCTTAGTTATGTTAATATATAATAAAGTAGTAAATAAATTCATTTAATATTTGCAATTTGCAGCTACAATTGGAGCCTGCAAGTTCTTCATGATATATATAATTTTGGCCGGTATTATTACTAACATCCTTTGTACCATTTGACACTGCAAGAGCAGTCTCATGTCCATACCTAACAAAAAAAACATTAAAATTGATTTCTTTAACTTTTTCTATTTTATTTATATGCTGCATGAATTTATTATGTCTTTCACCAAGCTGTGTCCCTAACTTTGAGAGGATCTCTAACTGACAGTAATCGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACATGATGACCTTTTAGTTTGATTTAATAGTATCTGATAAAGATAAAGATCCAGTTATAAATATAAGTATCAATCTGATTTCCTGGTTGGCAATCTAAACTCAAAATTTTAGAGTTTTTCGGTTGCAATGTGCAAGTGCTAGTTAGTAGTGAGTAATTTTCTTTTATAAATTTTGTATTTTGCTCTATAAATATAAATGTAATTCAATAAATTACTAAATTTTTAAAAATTCACTCGAATTAAGGGGAAAATTATTCTATAAAAAGCTATACAAAAAAGTAGCTACTAAATGAAATTTCCCTATATATTTATAACAAAAAAAGTAGCTATTAAAGGGAATTAATTTCTCTCTATATATTTATATACTATAGATAATACCTGTACGTGTCTATTGTTTTCAATTATCTATTTTTGTTGGTACAATTCAACTATCTATTTATACTTTTCTTTTTTACTTTAAATAGAAAATAAGGGTAAAAAATTTGAAAGTTGTCATTTTAAAAGTTAGGTAAGAGTACCATAAGTACAATCATGCCTTGTTGTAGCTTATAGCGATTATTAGATAAAATTTAGATGAATCATTTTGATTTCAACAAATTAAATTCAAAACACATATTTTTAGCATATAAAAACACATGATTGTTAAAGGAATTCAAAACACTTTCAAAATGTGAACCTTATAATGTTACTCAAATTTAATTTTGACTGCGGTAATTAAGAGTAATGCTATGTGGTACAAATTGTTTTCATACGAATTGTAAGAAAAACAAAGTATAATAATACACCATGTCGCGTGAATGCTTAAAATCATTTTCACGCTCTATCGTACATTTTGTTTCGTCATATAGAGTATTTCTCTTCGATATAAATAAACAAAGCACCTTACCCACATAGTGACAGAAAACAAAAGCATCAATCAAAGTTTCTTTCTCTCTAGTGTTGTCTTATTGAGAAGAAAGACCAATTTAATTACTATCTATGAATCTCACACACTTCTCATCTTTAAAACAATCCCAAATCGTTCGACAACCACAAACATCGTCTTTTAGATGCTGACATCTCAATAGAAAGAGAGAGAGATAGGTATGCTATTGCTATGTGTTATACTTAATTTCCTTCCCTTCACAATTTATTATTTATTTTGTACATTTAATTCAGTTATTGATTTCCTATGTGTACTATTGTACTTGTATCCCTTTTATCAGATTGTATTTTTGTTCTTCGATTCAAATGTTTTCTGTGATTTAAAAAAAAAAAATTATACAAAAGATTTGTAGAGGAAGAATAGATAGTTTTAAACAAACATGGTGCGGTTTACAATATTGTGGTTGCAATTTCGGTCAAAAAAATAATAATATATATTGTGGTTGCAACTTGCTGTGTTTAAATTTTTTTTTGAAAAATTCATAACTTAACAAATTTCCACTCACATGAATTGTTGTTCTCCATTTTCTTTTATTTGTTAATTAGGAGATTTAAACAATCCTAATCATTTCTATCTTATTGTTTTTATTTTATTTTCTTTCTCTTTTTTAATCAATAAATTTACAGTGATATAGGACCAATTAATTAAATTGCTTAAAAAAAGTGTTTTTCTAAAGTATTAATTTTTTATTACCAATTATTTCATATCCAGCTAACTTAAAATTAGCTAGAGATTCTTATTTCAAATGCAAGTGGATGGTAGCTAAAATGATTAACTGCTTGACAGAGTTTTTCCTGTATAATTCACCCATGATATGATTGATATAATAGTAATGAGTAATGACCTTCAAATTGGCTTTTCCTTTTACCAATTATAGGTCTATGATATGATCCACATCTGTTTATAATTATATTGTCCTACTCAAAATTGAAAGACCCCAAGTCATGAATACTTATAATATGCCAAAATACAATTATGTGGACTCTCGATCTCTCACGTGACATATCTAACACTCCTCCAACTGAGAGAAAGAACTGAGCATAAAAATAAATATATTATATATTTATGTCACATGCTTCCTTTCCCTTTATATAATCCTACTCCTCTTCTTTTGTTTTTGTGCATACAAACTCAAGTGCTCTTCAGTCTTCAACTCTCTCTCTCTCTCTCTCTCTCTTTTCTCTACTTCCCTCACTAGAGTGGTTAGTATACTTAGTACATGTATTTATGTATATATGTATACTAAATATATTATTAATTACATTATTAGCAATCTAAGTCCAATTATTTTTGTGACACTGATCTCTGCAGAATTTGAGCTTCAAACTGAGAAGCAACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00664.26	ABC_membrane	318	581	4.20E-62
PF00664.26	ABC_membrane	953	1197	4.20E-62
PF00005.30	ABC_tran	650	784	6.90E-50
PF00005.30	ABC_tran	1287	1435	6.90E-50

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0005524	ATP binding	Molecular Function
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Molecular Function
GO:0004497	monooxygenase activity	Molecular Function
GO:0005506	iron ion binding	Molecular Function
GO:0020037	heme binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR036640	ABC transporter type 1, transmembrane domain superfamily
IPR011527	ABC transporter type 1, transmembrane domain
IPR044726	ABC transporter C family, six-transmembrane helical domain 2
IPR044746	ABC transporter C family, six-transmembrane helical domain 1
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A8B8JU63	_

SwissProt

SwissProt term	Description
AB9C_ARATH	ABC transporter C family member 9

KEGG

KO	Description	Enzyme
K05666	ATP-binding cassette, subfamily C (CFTR/MRP), member 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G60160	multidrug resistance-associated protein 9
Medicago sativa L.	MsG0580025696.01.T01	_
Oryza sativa L.	LOC_Os04g49900.1	ABC transporter family protein, putative, expressed
Cucumis sativus L.	Csa000254	_
Glycyrrhiza uralensis Fisch.	Glyur000503s00017774.1	_
Codonopsis lanceolata	Cl_chr07_34110T	_
Arachis hypogaea L.	AH19G09890.2	ABC transporter C family member 9 like

Expression pattern