| Gene ID | Annotation |
|---|---|
| Am01G003310.1 | Sec23/Sec24 protein transport family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G003310.1 | mRNA | Chr01 | 11619384 | 11640814 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF04811.18 | Sec23_trunk | 123 | 390 | 1.30E-66 |
| PF08033.15 | Sec23_BS | 402 | 506 | 8.30E-29 |
| PF04815.18 | Sec23_helical | 520 | 618 | 3.10E-23 |
| PF04810.18 | zf-Sec23_Sec24 | 54 | 92 | 1.90E-17 |
| PF00626.25 | Gelsolin | 634 | 720 | 1.20E-13 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005096 | GTPase activator activity | Molecular Function |
| GO:0006886 | intracellular protein transport | Biological Process |
| GO:0035459 | vesicle cargo loading | Biological Process |
| GO:0005789 | endoplasmic reticulum membrane | Cellular Component |
| GO:0070971 | endoplasmic reticulum exit site | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR036174 | Zinc finger, Sec23/Sec24-type superfamily |
| IPR006895 | Zinc finger, Sec23/Sec24-type |
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR006896 | Sec23/Sec24, trunk domain |
| IPR006900 | Sec23/Sec24, helical domain |
| IPR036175 | Sec23/Sec24 helical domain superfamily |
| IPR012990 | Sec23/Sec24 beta-sandwich |
| IPR037550 | Sec23, C-terminal |
| IPR037364 | Protein transport protein Sec23 |
| IPR036180 | Gelsolin-like domain superfamily |
| IPR007123 | Gelsolin-like domain |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A9D5AY96 | _ |
| SwissProt term | Description |
|---|---|
| SC23C_ARATH | Protein transport protein SEC23 C |
| KO | Description | Enzyme |
|---|---|---|
| K14006 | protein transport protein SEC23 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G21630 | Sec23/Sec24 protein transport family protein |
| Medicago sativa L. | MsG0880042077.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g36994.1 | protein transport protein, putative, expressed |
| Cucumis sativus L. | Csa024761 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000279s00013263.1 | _ |
| Codonopsis lanceolata | Cl_chr07_12020T | _ |
| Arachis hypogaea L. | AH19G08940.1 | Protein transport protein SEC23 like |