Gene detail

Detail information of Am01G002590.1 Annotation

Gene ID	Annotation
Am01G002590.1	Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G002590.1	mRNA	Chr01	8821899	8825402	+

Sequences

CDS:

>Am01G002590.1
ATGGACATACCCAACCGTCCCGCAACCGCAATGAGCAGCAGCAGCACTAGTCTCCGTCCAGTTCCACCGCAAGATGCATGGACTCTCACTTCTCAAAACTTGCTCCCTCGTTGGCAATCCCTTTCCCCCTCTCACCAGTCAATGATCCCAATTTCAATATCGAGGGTTAATCAAGTTGATGCGGCAAGACTGGATGTTGAAATGTCGGCTATGTTAAAAGAACAATTGGTTAAAGTCTTCACTCTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCTGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGCGGTTCTCAATTTGGGTGGATAAACCAACTCCTGGTATTGCTCTCATGAACCTGAGGTACAGAGATGAGCGTGCAGTTGAATCAAGAGATAAAGTGAGAACTGGTCTGGAGGGACCTGGACTCACGGTTGCTCAGAAGATCTGGTACTGTGTCGCCACTGTTGGTGGTCAGTATATTTGGGCTCGCTTACAGTCCTTTTCTGCTTTTCGTAGGTGGGGTGATACTGAGCAGAGACCATTGGCACGGCGATTATGGATCTTGTTACAAAGGATAGAAGGAATGTATAGAGCCGCTTCATTTGGAAACCTGTTGATATTTCTTTACACAGGAAGATATCGGAATCTTATTGAAAGAGCCTTACGAGCTAGGCTTGTATATGGGAGCCCAAATATGAATCGTGCTGTTAGCTTTGAGTATATGAACCGACAATTAGTTTGGAATGAATTCTCGGAAATGCTATTGTTGCTTCTTCCTCTTCTTAACTCATCATCGGTGAAAAATCTACTTCGACCTTTTTCTAAGGATAAATCATCAAGTTCGGCCGAGGATGGCAATGCATGTCCCATTTGCCAGGCTACTCCAACCATTCCTTTTGTTGCTATACCTTGTCAGCACAGATACTGTTATTACTGTCTTCGGACACGATGTGCTGCTGCTCCGTCATTTAGGTGTTCCCGGTGCAGTGAGCCAGTTGTTGCTATGCAACGCCATGGCAGTGTCTCCACAGAATAG

Protein:

Promoter(3k):

>AM01G002590.1
CAACTGGAGAAACCACATAGGACCCTGAATCTTGGAGACTCGACCGTAGTCCTTGATCTGGTCGAGCATGATTTGGATCCCTCGGTAGAACTCACCAAGAAAGTAAGGGGCCCAGGCGTAAACGTCCCCACTAGTCATCATGGCAACAAAGGACTGTAGCTCCTAGATGACGCGACGTAGAAGAATCTGCAGAAGAAGTACATAAGGAAAGCAGTGTGTTCCTCGTCAGTGATGTTGGCATCGGACTTGGAGTTGGCAATCAGAAACTTTGAATAGACCCCTCCAGCATGGATATGGCCCAAGTTCACCTTCCTGGGCTGTCTTGCAGGATTGATGCAACGGTCGAACGCGGGCAAACCAGTAATGGCGGCCACATCCAGGATGGTGGGGGTAACCATGCCTCAGGGAAATATTAAAGCGTTGAAGGGAGAAGACCAAAAACCTAAGAGGGGTAAAAGAACGTCAAAGTTATGAGGGATGGCGAAGGTAGAGAGGGCGATCATGTCACGTACACCCCAAGCCTTCCAAGCGTCTTTCTTGATAGGATGAATCCTATCAAACCAGGCGATAGTCATCGGTGGGTCCGGCCCAACCTCTGGTCTCTGACACCTTGGCGTCAACGGTGAACCAATCTTGGGTGAGTGGTATACCGGGACAAGCCGAAGTGTTGAAGGTTTGTTTGAAGGCATTAAAGCCTTCACCAACGGAAGAGGTGGTAGGCCGCACTGTGATTCCGCCTGGGACGGCAACGAGGATATCCTTTGGGGAAGCTTCAGGGGAAGCGATTGCTGAAGAAGGACCAGAAGAAGAAGAACTTGGTTGGCTACTATTTCTGCCATAACTATGGTCACGGTTCTGAGAGTCGGAGTTTGAAGACATGATGGAAAGCGGTGGTGATGACAATGGAGAGAAAGGGTTCTGTTTCGCAAAGAGAGAAACGAAAGAGGAGAGAAGCGTTTCCAAAGAAAGCGAACAGTCTCGCGTGATCGTAACCACTTATGGCTTTCGCAAACCTTGGGAACCGTTGCGCCACGCTAGTATCCCGCGCAGAGTGAAACTGCCAAGTGTCACGAAACGGTAGGGTAGTCACTTCAAAACGGTCACATCAAGTCATCTCAAAGGGTTCTTTTTGCACTATCAGTCACGTCCTCGCGGCCACACGAGCACAAAAAGGGGGGCAATTGTTAACACCCAAAAATAATTAGGTCGTAGGCCGAGGACTGAATGAAGAAGGCAATGGAGCTGGAGTATTGAGGCAGGTCACTAGACAAGGATTTTAAGAGATAATTGCCTGAGAAAATGATCAAGGGAAGCCCTCGGGGCATGTCACTACACAACTCCCCGAGGAAGAGGTTAGCCCAAGAAGCAATGAGCGAGACTGAGGGAGAGTACAGCCTCAGCCTATAGAGTGCCACGGCCAGGGTAGGCGCGGGTGCCTGAGTTACTGTTTGAGGGCGAAGGTTAACTGAGTGAACCAAGTGGCTGAGGTAAGGCGGTTTTACTTGGAAGGCACGTAAGAGACATGCACGAAGATGGAACGTGGGAGCAATTGAAAATCAAGCGAATGAGCGAAGCCTTGAAGAGCGGAGTGAGGGAGTTCACCCCACTAACCGTGCTAGTGAGATCGTGGGTGGTTACTCCGCCTTCTTAGGGCTTAGGAACAATGATAGTCGTTGATCTTAGACTTATCCAACGGTAGGCAAATGTTGGCTGTGTTGGTGGCCGACGAGGGCCTATGTATATAAATAGGAGAGTAATTGTACAGAAAAGACACACATCAATCAATCAAAAACTCTACGTTTATTTCGTCTATCTGCTTTTATCGCATTTTATCTTTATTTTTATGCATTAGCCAGTAGTATAATCCAACCCTCGCAGTCCCCTCTCACCTAATCTGGCCCTTTCTAGAGGAGTCATGATACCCACAGTCAAGGAGCAGAGTTCCCTCCTTGGCGCAATCACTTGAAGAACAAGGAATCGAAGAACTTGCTCAAACCCCTAGCCGAATCCACGGCTAGGACATAAGAGTTTGAACCAAAGAACCAACAGAGAGATGTTCACTTTTTGTGGATGGAAAATTCTTTTTGACATTTGATTAGTGTAGTAGCACATGTATGACTCGACGACTTACATAAGTTGGATATTGTTACATCTTATTTGTATGACTCACTCGATAATGAGATTTAGTCCCATTGTGTTTTTTTAGTAAGGTTTTAACAATGAATATTCTACTTTTTTCCCTCATAAATTTTTTCCGTTGAATATTTCTTATGAATATTTGATAGATATGTATCTCCAATCTCCCATTTCATATTCCATAAGATATTCATATTAGTCCAATGATCAATTTTTTTTTACTCATCCCTATTTCTCTTGACTTCAAATGTTAACTATACATTATGTTAAGCCCTTAGCATGCCGGTATATTACAAGACTTGAATATTATAAATAGAAGTTGCATTGCATTATAAAGATGACACCTTAACAATATAATACAAAGAGTCAAAGACATTTTTTATAATTATAAATACCTAGCAAAAACTCCATATATTGTTTTTATTTTAGTTCATTTTATTATTTTTATTATTGTTATGATGACGGATAGTTCATTTTATTATTGTCTCCTACTATTTGTTGCATCGACAATTTTAGTGATACAGAGAGGTTCACTCTCAAACTCAAACATGAACGTGAGCCGTAATATTGCATGTGCGTGGTGTCTATATTTTTTTCGAAACATAGACACTGCCATAAATAATGTAAAAAGTTTTGTGAAGACAAAAAGAAGGTTATTTTGTCAAAAAAAAAAAAGGTAGCTAGGAAAAGACCAAAAGGACCCCCCATTTGGTAATGCTGTGCTGTTGCAAAAATTCCCTCACAATCACACGCTGGAATGGAAGCAGTGACCTGCGGTGTGGAACCGCTTTGTAAACAGTGTTGAGCAATTACCAGAGCATTCTAATCTCCCTTTCTCTCTTCAAAATACAACACAAGCGGTGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF04757.17	Pex2_Pex12	65	269	1.50E-37

Gene family

Gene family	Subfamily
Transporter family	PPI

Gene Ontology

GO term	Description	Category
GO:0016558	protein import into peroxisome matrix	Biological Process
GO:0005778	peroxisomal membrane	Cellular Component
GO:0008270	zinc ion binding	Molecular Function
GO:0016740	transferase activity	Molecular Function
GO:0016874	ligase activity	Molecular Function

InterPro

InterPro term	Description
IPR017907	Zinc finger, RING-type, conserved site
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR018957	Zinc finger, C3HC4 RING-type
IPR006845	Pex, N-terminal
IPR025654	Peroxisome biogenesis factor 2/10
IPR045859	Peroxisome biogenesis factor 2, HC subclass-RING finger domain

trEMBL

trEMBL term	Description
A0A1S2Z797	_

SwissProt

SwissProt term	Description
PEX2_ARATH	Peroxisome biogenesis protein 2

KEGG

KO	Description	Enzyme
K06664	peroxin-2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G79810	Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein
Medicago sativa L.	MsG0880042325.01.T01	_
Oryza sativa L.	LOC_Os05g19480.1	peroxisome assembly protein, putative, expressed
Cucumis sativus L.	Csa024014	_
Glycyrrhiza uralensis Fisch.	Glyur000770s00019677.1	_
Codonopsis lanceolata	Cl_chr02_06470T	_
Arachis hypogaea L.	AH18G01630.1	Peroxisome biogenesis protein 2 like

Expression pattern