Gene detail

Detail information of Am01G002470.1 Annotation

Gene ID	Annotation
Am01G002470.1	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G002470.1	mRNA	Chr01	8457015	8464986	-

Sequences

CDS:

>Am01G002470.1
ATGGCCTGCAAGGATGGTAACAAACACTTAATGGATAACGGAAAGTATGTCCGTTATACACCTGAGCAGGTTGAAGCTCTCGAGAGGCTTTATCATGAATGCCCTAAACCCAGTTCTATTCGCCGTCAACAACTCATACGTGAGTGTCCCATTCTCTCTCACATTGAGCCTAGGCAAATCAAAGTTTGGTTCCAAAATAGAAGATGTAGAGAGAAGCAGAGAAAAGAATCTTTTCGGCTGCAAGGTGTGAATAGGAAGTTGACTGCCATGAACAAGCTGCTGATGGAGGAAAATGATCGGTTGCAGAAACAGGTCTCTCATCTGGTGTACGAAAATGGATATTTTCGTCAAAACACCCAGAATACTACGCAGGCAACCAAAGACACGAGCTGTGAATCAGCTGTGACGAGTGGTCAGCACGGGTTGACTAGTCAACATCCCCCGAGGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAAACTTTAGCAGAATTTCTTTCGAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTCGCTATTTCTCATGGTTGCACTGGTGTGGCAGCTAGAGCTTGTGGTCTAGTGGGGCTAGAACCCACAAGGGTTGCCGAAATCCTCAAAGATCGACCTTTGTGGTATCGTGATTGCCGAGCTGTTGATACTATCAACGTGCTGCCCACGGCAAGTGGTGGAACCATTGAGCTGCTTTATATGCAGCTATATGCACCAACCACATTGGCACCTGCTCGAGATTTTTGGTTGTTACGCTACACTTCTGTTCTAGAGGATGGAAGCCTAGTGATCTGTGAGAGGTCTCTTAAAAATACTCAAAATGGTCCAAGCATGCCTCCTGTGCAACATTTTGTTAGAGCAGATATGCTGCCTAGTGGTTACCTGATAAGACCTTGTGAAGGAGGTGGTTCCATCATACACATTGTTGATCATATAGATTTGGAGCCATGGAGTGTGCCAGAGGTGCTACGTCCACTCTATGAATCATCAAAAGTGCTGGCTCAGAAGACAACTATGGCGGCCCTACGTCATCTAAGGCAGATTTCGCATGAAGTTTCTCAGTCCAACGTCACTGGATCTGGATGGGGTAGACGACCAGCAGCTCTACGGGCATTAAGCCAGAGATTGAGCCGGGGTTTCAATGAGGCACTCAATGGATTTACTGATGAAGGATGGACAATGATGAGCAATGATGGTGTAGATGATGTTACTATCCTTGTGAACTCATCTCCTGACAAGTTAATGGGTCTGAATCTTTCCTTTGCTAATGGATTCCCTTCCGTCAGTAATTCAGTGTTATGTGCCAAAGCATCAATGCTATTACAGAATGTGCCTCCAGCCATTCTCCTAAGATTTCTGCGGGAGCATAGATCAGAATGGGCTGACAATAACATGGATGCCTACACAGCTGCTGCTATTAAAGTTGGCCCTTGTAGCTTAACAGGATCTCGCATTGGAAATTACGGGGGTCAAGTTATACTCCCTCTGGCACACACTATTGAGCACGAGGAGTTTTTGGAAGTCATTAAATTGGAAGGGGTTGCCCATTCTCCTGAAGACACAATGATGCCCAGCGATTTGTTTCTGTTGCAACTCTGCAGTGGAATGGATGAGAACGCTATTGGGACCTATGCAGAACTTATATTTGCTCCAATTGATGCTTCCTTTGCTGATGATGCCCCACTTCTACCTTCTGGATTTCGCATCATTCCTCTTGAATCTGGAAAGGATGCTTCCAGCCCTAATCGCACTCTTGACCTTGCATCTGCCCTTGACATTGGCCCCACTGGAAACCGAGCTTCAAGTGATCATGCTGGTAATTCTGGCTGTATGAGATCTGTGATGACAATAGCATTTGAATTTGCATTTGAAAGTCATATGCAAGAGAATGTAGCATGTATGGCACGTCAATATGTTCGCAGCATTATATCGTCAGTCCAAAGGGTAGCATTGGCACTTTCTCCTTCTCATTTGAGCTCACATGCTGGGTTGAGGACACCATTGGGTACTCCTGAAGCACAAACCCTTGCTCATTGGATCTGCAACAGTTATAGGTGCTACTTGGGTGTAGATCTACTTAAATCTAACAATGAAGGGAAAGAATCTATACTCAAGTCCTTGTGGCATCACTCAGATGCCGTATTGTGCTGCACTCTAAAGGCATTGCCGGTTTTCACTTTCTCTAACCAGGCAGGGCTTGACATGCTGGAGACTACGTTAGTTGCATTACAAGATTTAACTTTAGAGAAAATATTTGATGATCATGGACGAAAAATTCTCTTTTCAGAGTTTCCCCAGATTATTCAACAGGGTTTTGCATGTCTTCAAGGTGGTATTTGCCTCTCAAGCATGGGTCGTCCTGTCTCATACGAAAGGGCTGTTGCTTGGAAGGTGCTGAATGATGAAGAGAATGCTCATTGCATTTGCTTTATGTTTATGAACTGGTCTTTTGTTTGA

Protein:

Promoter(3k):

>AM01G002470.1
TTTTGACTTGTTATTTTAATTTTGGGTAGTGATGACTACTCCATTGTTATAACAGCAGTTGCCCAGGCTTTTAGTCCATACAAATATAACGAAATTTTGTTAATTTAAACTTGTGTTTTAGGGAGTCAACAATGTTTGGTCATCAAAAAAGTTATGTGACACTTACCACACCGATTTTGGTTTAGTCAAGTTAAAGACGATTAATAGCGAGAACTAAAATTGAAAATAAAAAATTTCAATTTTATATTAAAAGTCAGTTGCGAGCAAAGGATGTCGAAATTTTAAGTATGATGTTAATATCGTTGACCTTGAGATATATACCGAGAATATCCACAAAAGGAACTCTATTACCTAATTTACCTTTATGAAGCCACTTCTCATACCACAAAGAAATGTCACCCTCTCACCCTACACGTATATTCCGAATTTAAAATATCAACAACCTTCACAATGATTTTCAAGTTAAAGAAGCCCTTTATCATTCGATTCCAAGAGAATATGGGAATTTGAAAGATACTTCTTTGACAACAATCTCACATTAGATGATGGATAAGATTCCACATATGCTTCCCCACGTTAGAAATATTGATAGGGTTAGCTCAACAGCAGGGCCGTCCCAAACAATACGGAGGCCCTGTGCAAATCATAAAAGTGGGGCCCTAATTATATTTTTACCAAATAAACTCAAACTTCAATAAATTACTCTTAATTTAATTTTGTTTTTTTCATCATATTTCAACAGAAACAAACATTGAAGAATATAGAACATAAAACGGAGTCAAGGCAACGAACTAACCTTAATAGCAACCGTTAGCGTCTAGATGAGTTCGGCAACGATAATCAATCGACAACGATTCTTCACAAGTCTCTCCAATTACGATTCTTCGACATAATGAGAAAAAAAAAAGAAAATCAGAATTTCCAATTAAGTAATTAAGTAGTAATAAAATAGAAGAAAGGGAGAACAAATAAATTAAATAAATTGTAGTGTTTTTTTGAGTGATAGAAGAAAGGAAAATAAGATAGAAGATAGATAAATTCTGATAGGAAATTAAATAAATTGGAAACTACAATTGGAAAGACATGATGTAGCCGTAGGTTTTGGAAACCGATTAAATAAATTGGAAAGTACAAAAAAAGGAAATTAAATACTACAACTTGACAAGACTGAAAAGAAACGCGTTTGTACCTACCTATGGTTGAGTGCTGGAAAGAAACACACTGAAGAGTGAAGACAAGACTGAAGAGACGCGAGAAAGAACACGTCAGGCCGCAGGGAGAAAAGGACCGCGTCAGTGAGGGAAGGTATCAGAGAACATGTTTAGCTTTTTTTTTTGCAAGGTCAGATATATATAGTATTGGTATTGGGCTAATATGGGTGATTTTGGGGCCCCAAAAAATTATTTTTGGGCCGAGGCCCTGTGCTGTAGCACAGGGAAAACTGCTAAATGGACACCCCTGCTCAACAGACTCTCCAACCCTCTTTGCTAGTAGTTTTACTACTCTTGCTTCATTTGATCCAATGTTAAGTCGTGTCATCAAATGAAAGAGTAAAATTTTGCATTTGTGCAAAAATAACATGGTTTTAAAAAGAGACTCCAATCGATCAAGTATTAATCGTATAAATTGTTCGATTCACTAATTTGACTAGTTATGCCCTTGACTTATGAGAATCGATGTGAACCAGCCAGTTTTATTTGGAAACTCTAGTGAATCGACGACAGGGACCCATCCACGAGTTTCTCTTTTTTGGCAAATTTTTCATTTTTCTTACACTACATAGTTTATCAAAGTAAAGAATTGTCAAAATATGTGCTCATTATACTAATTAACATTAGTTAACACGATTTAACAATAGTTACCCCGAAAACTAACATTCTCCCACACCACTAACATTGCTTATAAAAAAAAAAACAATCGACCTACCGGTCTGACCAATGACCTAGTATTGCCATCGAGTTGATCACCGTTTCGAGTTGTAAAACACTAAAAAGAGTGTAATTAAAATTAGCTAAAGATTAACTAAAATTTCTAAAAAAACGTAAACAAACCTTTGAGGACAAAGTTGTCACAATCATTTTTAAGATTAAGACCAATTTCAACGAGATGGGATTCCGTAAGAATATTTTCACACGAAAAGAGAAAGCGATGAGGAAAGGAGGCAAGACGACAAACATGCAGTGGGAAACGGCGCCGCTAGAGAAGGGTAATTTGGTCCAAACAATCTCTTGTCTCGCGCTTGCGTTGCGCACTTCATTGTTCTTTTTTTAAAAAAATATTATTTTAATCTTAAAAAAATAACAGTGCTCGATTTCGCAACAGCTACACAGTGCCGAACCAATCAAGACAGTGTGACCAATCTCAGACAAAGCACTCATCACCTCACCACACCGCAAAAGCAATTACCCAAACCTCTCAACTCACATCGAATCACTGAATTAGGGTTTCAGCAATTTTTATTCCCCTTGAAAAAGAAACATGCATATTCACAGAGAAATTTCACCGTGCTGAAGATTCTCTTCTTCACTGTAGTTTCCATAACTTTATAGCAGTTTTTTGTCCTTGTTCTTATCATGTCTTATTTTCCATGTCTTATACTCTGAAATCTTCTGTCAAAGCATGATTCACGGATCAAGCAGAATTCCAACTCCACTACATGGCGATCGGTTGAACGGCGTCGTTTTAGAGTTCCCGGTGATACTCTATTTCAATCGAATCCAGTAAGCGACATCGTTTCCGATTTCCAAAAAGTAACCGTTTCAAGTTTCACGGAAAAGCTTGTGGCGAACCAGATCGTTGCTTTTTTGAGTTTGCTTCTTCTCTGATCTTTTTTTGGTCACGTTATTCTTGTGTTGGTAGCGAGGTTATCGTGTGTGTGGCTGGTTCAAAAATGCATAGCAAGTCTTAAGAGGAGGCGTATTAGTAATTGTGGTGGTGTAAAAAGTAAGGAGAACTAGAAGAAAAGCAAAGAACTTTGAAGTTTTTTGCGGTGTGTTAACG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01852.22	START	159	367	1.50E-54
PF08670.14	MEKHLA	695	837	1.40E-50
PF00046.32	Homeodomain	15	73	7.80E-17

Gene family

Gene family	Subfamily
Transcription Factors Family	HB-WOX
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0048263	determination of dorsal identity	Biological Process
GO:0009965	leaf morphogenesis	Biological Process
GO:0010075	regulation of meristem growth	Biological Process
GO:0010014	meristem initiation	Biological Process
GO:0010087	phloem or xylem histogenesis	Biological Process

InterPro

InterPro term	Description
IPR023393	START-like domain superfamily
IPR002913	START domain
IPR013978	MEKHLA
IPR009057	Homeobox-like domain superfamily
IPR001356	Homeobox domain
IPR044830	Class III homeodomain-leucine zipper family

trEMBL

trEMBL term	Description
A0A1S2YUW6	_

SwissProt

SwissProt term	Description
ATB15_ARATH	Homeobox-leucine zipper protein ATHB-15

KEGG

KO	Description	Enzyme
K09338	homeobox-leucine zipper protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G52150	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Medicago sativa L.	MsG0880042342.01.T01	_
Oryza sativa L.	LOC_Os03g43930.2	START domain containing protein, expressed
Cucumis sativus L.	Csa009954	_
Glycyrrhiza uralensis Fisch.	Glyur000041s00007085.1	_
Codonopsis lanceolata	Cl_chr02_06790T	_
Arachis hypogaea L.	AH18G01850.1	Homeobox-leucine zipper protein ATHB-15 like

Expression pattern