Gene detail

Detail information of Am01G002190.1 Annotation

Gene ID	Annotation
Am01G002190.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G002190.1	mRNA	Chr01	7642927	7658181	-

Sequences

CDS:

>Am01G002190.1
ATGGAAAGAGAATCACTGCATATTGTCGCCTTAATGTTAAGCGCATGCATATTGCTTTGCATTGCTCCTGCCAATTCAGAAAAACTAGACAACACTGTTGCAAGAGAGACTGCTAACTATGAAAATCCTGATTTCATAAGCATTGATTGTGGATCAAGCAAAAACTACGAGGACAAGGACACAGGAATTTGGTATCAGACAGATGGAGGGTTTGTGGAAACAGGAAATAACTATGCGATTTCATCCAATGTCAGTTTTAACGATCCCTACTACGGGAAACTATTGAACACACTGAGATACTTTCCAGATGGAGACCGAAACTGCTACACATTGAAACCAAAACAAGGCAAAAACAATCGATATCTCATAAGGGCATTCTTTGCATATGGAAATTATGATGGCAAAAACCAAACCCCTGCAGTGTTTGACTTGTATCTTGGAGTCAATTTTTGGAAAGAGGTTAATATCAGTGATGCTAATCGCTACATTTATAGGGAGAGCATTCACACCTCTTTAACTGATACTATAAATGTGTGCCTTGTAAGGACTGGTTCAACTATTCCTTTCATATCTTCTTTGGAGTTGCGGCTTTTAACCAATTTCATTTACACGGGTAGACAGATCATGTCAACCAATGATCCACAGCCTCAGTTGAAATTAGAAACTAGAGTTGATGTTGGATCCCCTGGATATCGATCGCCTCTTCGTAAGAAATTAATGAGGTACAAAGATGATGTGTATGATCGCATATGGCTGTGCAACCCAAAGTATGATGATGAATATGGTTGGCAACCATTGAGTGGATCTATTGATTTTGATCCTAGAACCACCAATGACTACAAATTGCCAGACCAAGTATGGAGTAGTGCAGTCAAATCACCAAATGTTTCCCAGTCATTAGAATATGTCCATGACACTGCGTATACAGCCCTCAACATGCGTTATGAGTATTATGTCTACTTCCACTTTGCAGAAATTGATGAGAAACTTCTGGATGGGCAAAAGAGAATAATCAACATCACCCTTAACTCCCAACCTGTCACCACTCAACCTTTGCCTCTTGAATATATGAAGCCCATTAGTGTTGAAGCCACAACTCATGGTGACATTTCATTTCGCATTAGTGCAACGTCACAATCTGATGCTCCTCCTATCCTCAACGCCTTTGAGATCTATAAGGTGATAGCCAAAGATAACTTACCAACAGATGAACAAGATGTCAGTGCTATTCAAGATATCAAAAGGACATACCAGATCTCTAGATTGAGTTGGCAAGGAGACCCCTGTCGTCCCCAAAATTATACATGGGAAGGTCTCCTTTGCAGCCCTGACAGTGACACCAATCCAAGGATCACATCTTTGAATCTGAGTTCAAGCAATCTGAAAGGGGAGATAAATATTTCATTCTTATATCTTGCAGAACTAGAATTCCTGGATTTATCACACAACGAGTTGGAAGGAAATCTGCCGGAATTTCTGGCACAACTGCCAAAACTAAGACTTCTTAATCTGACAGGGAACAAGCTTTCGGGTCCAATTCCTAAGGCTCTCAAGCAAAAGAAGAGGGGTCCAATGAAATCAAAACCTCAAGCATTCAGTTACGCTGAGATTCTCAATATTACTGATAACTTCAAAACTATTGTTGGAGAAGGAGGTTTTGGAAAAGTTTACGTTGGCAATCTACATGGTGACACTCAGGTCGCTGTTAAGATTCTTTCACCATCGTCAATGCAGGGCTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGTTACTGCGATGAAGGTGAAACCAAAGCATTGATTTATGAATATATGGCCAACGGAAATCTCAAACAACACTTATTAGCGGGATATCCAAATATCTTAAACTGGAATGAGAGACTTAAAATCGCAGTTGATGCAGCACACGGACTAGATTATCTGCATAATGGCTGTAAACCACCTATTATACATAGAGATTTGAAGACTTCCAACATATTACTAGATGAGAACATGCATGCCAAGATAGCTGATTTTGGTCTAAGTAGAGCTTTTGGTGATGATATTGATTCCCATGTATCCACTCGCCCTGCCGGTACACCAGCTTATGTTGACCCAGAATTTCAGAAAACGGGAAACTCAAATAAGAAATGTGATATCTACAGCTTTGGGATAATTCTATTTGAGTTAATCACCGGAGAACAAGCAGTTATAAGAACAACAAAAAAGAACATTCACATACTTCAATGGGTTATTCCCATAATTGAAAGAGGAGATATCAAAAGTGTTGTTGATCCGAGGTTACAGGAAAATTTCAATATCAATTCTGCATGGAAAGCGGTAGAGATTGCATTGTCATGCATTTCACCTAATGTAGCTGAAAGACCAGACATAAGCCAAATATTGGTAGAGCTCAAGGATTGTCTATCCTTGGAGATGACTCAGAGAAATAACGAAAGAGAAAGCTTTATGGTTGAATTTAGTTCTTTGCAAATTGACTCAGATATTTCTCCCATGGTTAGGTAG

Protein:

Promoter(3k):

>AM01G002190.1
CATACAAGCTGCCAACATTGGGAAAAAAATAGATACCAGACGCAGAGAGAGAGTATTGGGAAAAAATTTTGCTAACACAAAAAAGCTATGATTGACTTTTAGCCTATGAAGCCTGGATACCGGATACGAAACGGGATATGACACGATACGGATACGGGGATACGGGAAAATTTTGAAAATCAAGATACGACACGGCTGGGATACTTTAGTAAAAAATTAAATTAAAATTTAAATATATAAAAACATAACAGAAAATAAAATAGAATAGAAACACAAGTAGAAAAAAAACAAAGATGAAAAACTGAAATATTGCATTTTATAGATATGAAAAAAAACTGCCCAAATAGATAAAAAAAATCACACAAAATATATGGACCAAAGGAAGAGGACAACCGACACACCTATGTATGAGTGACTAGTCATAAAAAGTGGTGGACAAGTAACTGAGACCACCCGAAATCGTATAATACGAATAGTTAGTGGCAGAAATAGATGACTTTTTATAGACTAAGATATTCATATTAGTACGTAATTGGTCAATACAACATAAGCATATCATTAGTCAATATATATTCATCACATTGTTGAAATAAATATTTGTGATCTTATCAAGTAGAGATAGTTACGTATATTTATCTCACTCATATCACAATGTATTATTTCTTCTATTATTGTATTACGAAAAAACATATAATTTTGTCTTTTAGTTATTGAGGTATTAAAGTGTATCATATATGAGTGACAATCATGTGCTTAGTTGGTAAGAGGTATCGAAAAAGTATCTGAGAAGTATCATTAGTTGGTAAGAAGTATCAAAGATGTATCTGAAAAGTATCGAGTCAAATATTTTTTAAAAAGAATTAAAAAATTATTAGATACTCTTTGGGTACGTATCGAGAAGTATCGGGTGCGTATCGGTATCGGATACGTATCCGACACGGGTACGTCTCCATTTTTGAAGTATCAGGGCTTCATTGCTTTTAGCACTTGTTACTACTTTTAGCATTTTCTTGAAAATCTCTAAAAACTAATCTCTATGAGCCCGTTTGTTACGGCGTTTTTTTAAAAAAAATCATTTTTTTAAAAAATAATCACTGATGACGACATGCTGTCCGTTTGTTACAGATTCTTAAAAAAATGAAAAGCTGAAAATAATCTAAAAACTGCTTCATATAAGAAGCTGTTTTGAGTAGCTTCTCATAAAAATCTTTTTTTAAAGAATGATTTTTTTTAAATAATTGATTTTCAGTATGTCAAACAAACACAAAATAACTTTTTTTATAATTAAATGAATATGATTAAATTAATATTAAATCATATAGAAAAAAATGAGTAAACGTCAAGCGGCAACGGGAGCGGCAACGAGAGACCGACAATGGGATCGGCAATGAGAGCGGCAACGAGAGATTGACAATGGGATCGGCAACGGGAGCGGCAACGAGAGCGACAACGATAGATGGCAATGTGATCGGCAATGAGATCGGCAACGGGAGCGCCAACGGGAGCGACAACGAGAGAGGCAACGAAAGCGCCAATAAGGGTGCCAACGGGAGTGCCAACGGGAGTGCCAACGGGGGTGCATATTTTACCTTAAATAAAAAATAAAAACCATACCTCTAACAAAAGTTTCAAAATTATTTTTTCCAAAAAAATCAATTATTAACTTAACATTACAAAATAACTTTTTTATATTTAAATGAATATGATTAAATTAATATTAAATCATATACAAAAAAAAAGGAATAAACATCAAACGGCAACAGGAGCGGCAACGACAGACTGACAATGAGATCGGCAACAGGAGCAGCAACGAGAGCGACAATGAGAGATGACATTAATTATGATTGGCATCGGGAGCGCCAACGGCAGCCACAACGAGAGAGGCAACGAGATCGCCAACAAGAGTACCAACGGAAGTTCCAATGGGGTGCATATTTTACCTTAAATCTCATTTTCCATTTTCTTCATTTTTTCTCCATTATTAATATTATAAGAAGATACCGATTTTTTTTAACTTTTTGCAACACAACTATTTTAAAAAATTTCAAATATCGTCTTTTATCGAGTTTTTCCTTTTTCTTTTATTACATTTTACAACTTCCAATATATTTATAATTTCATAGCAAATTATAACAAATTAAAATCTCTAAAAATTAATCTCTAAATTATTTAACACAAAATCACTTATTTTTTAATCCGTAACAAACGAGCCCTAAATTATTTAACAACAAAATCACTTATTTTTTAATCCGCAGCAAACAGATCTTTACTCATTTTAACTAAAATCAATTTTGTCAAAAATAAGTTAATGTCACGGCAAAACCAATAACCCAAAACCCTAAAACCCTGAACCCCAGTCACACAAGATGATAGGCCACAAACAAAAGGATACACAATTATTTTCAAGCGTTTGAACGGGTTTCACAAATCTAACGGTGGATCATCTGTTTCTGATTTTTTTCCAACTAATCTGACACGGTTCACATTTATCAGTCGAATGCTCTCACTTAATCTAACGAATCACATAACTTGCTTACCATACACAACCTATCCCTATTGTATACTATAGAATGTCATTCATAATACAGTTACTTTTAGATTCATTCGCACTTGACTTGACTCTGTTGATTCACCTTTCACCCTTCCAACACGCCATTCAGCTATGCCCGTGCTACACTCAACTCAAGTTAACTCCACACACCAATTTTTTCTTTCTTCTTTTTTGACTAAACTAAGAAGTTGCTAGGCAGACAAAATTTATCAAACTACAAATTTTTCAATATATATACATTTTAGGAGACTAATAGTTCTTCAGGGTCTCCTTGTCATACATTACATACACACTCCTCCTCAATTCCGTAGAACTTGGAGTATACACATATATGATATATCAAGTTTTTTGTAAGTTCATATTTGTTGCGGTTCTTATTCCTCTTAATTTTTTCTTCTTGACTAAGTAACATATTCTTCTCTGCATACATAACATGACAGATAACATAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF12819.10	Malectin_like	48	394	8.10E-87
PF07714.20	PK_Tyr_Ser-Thr	544	810	4.90E-48
PF00069.28	Pkinase	545	808	1.30E-43
PF13855.9	LRR_8	449	509	1.90E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.8.1:RLK-Pelle_LRR-I-1

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0004888	transmembrane signaling receptor activity	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR024788	Malectin-like domain
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A072TLD6	_

SwissProt

SwissProt term	Description
Y1570_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g05700

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G46420	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0880043072.01.T01	_
Oryza sativa L.	LOC_Os02g05730.1	protein kinase domain containing protein, expressed
Cucumis sativus L.	Csa009930	_
Glycyrrhiza uralensis Fisch.	Glyur000221s00012508.1	_
Codonopsis lanceolata	Cl_chr05_37730T	_
Arachis hypogaea L.	AH19G05300.2	Receptor-like protein kinase At3g21340 like

Expression pattern