| Gene ID | Annotation |
|---|---|
| Am01G002130.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G002130.1 | mRNA | Chr01 | 7507269 | 7508864 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 196 | 245 | 2.10E-83 |
| PF13041.9 | PPR_2 | 232 | 280 | 2.10E-83 |
| PF13041.9 | PPR_2 | 266 | 307 | 2.10E-83 |
| PF13041.9 | PPR_2 | 302 | 349 | 2.10E-83 |
| PF13041.9 | PPR_2 | 337 | 386 | 2.10E-83 |
| PF13041.9 | PPR_2 | 373 | 420 | 2.10E-83 |
| PF13041.9 | PPR_2 | 415 | 456 | 2.10E-83 |
| PF12854.10 | PPR_1 | 229 | 260 | 6.00E-72 |
| PF12854.10 | PPR_1 | 262 | 294 | 6.00E-72 |
| PF12854.10 | PPR_1 | 298 | 331 | 6.00E-72 |
| PF12854.10 | PPR_1 | 334 | 366 | 6.00E-72 |
| PF12854.10 | PPR_1 | 370 | 399 | 6.00E-72 |
| PF12854.10 | PPR_1 | 439 | 470 | 6.00E-72 |
| PF01535.23 | PPR | 235 | 264 | 1.10E-57 |
| PF01535.23 | PPR | 305 | 334 | 1.10E-57 |
| PF01535.23 | PPR | 340 | 368 | 1.10E-57 |
| PF13812.9 | PPR_3 | 222 | 278 | 9.80E-50 |
| PF13812.9 | PPR_3 | 296 | 350 | 9.80E-50 |
| PF13812.9 | PPR_3 | 360 | 416 | 9.80E-50 |
| PF17177.7 | PPR_long | 120 | 276 | 7.10E-21 |
| PF17177.7 | PPR_long | 360 | 471 | 7.10E-21 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0140053 | mitochondrial gene expression | Biological Process |
| GO:0005739 | mitochondrion | Cellular Component |
| GO:0008270 | zinc ion binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| G7KRP3 | _ |
| SwissProt term | Description |
|---|---|
| PP338_ARATH | Pentatricopeptide repeat-containing protein At4g26680, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| K17710 | pentatricopeptide repeat domain-containing protein 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G26680 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0780040410.01.T01 | _ |
| Oryza sativa L. | LOC_Os10g21920.1 | PPR repeat containing protein, expressed |
| Cucumis sativus L. | Csa007777 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000021s00002693.1 | _ |
| Codonopsis lanceolata | Cl_chr04_16830T | _ |
| Arachis hypogaea L. | AH09G03670.3 | Pentatricopeptide repeat-containing protein At4g26680, mitochondrial like |