| Gene ID | Annotation |
|---|---|
| Am01G001940.1 | ubiquitin-specific protease 6 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G001940.1 | mRNA | Chr01 | 6927976 | 6940290 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00443.32 | UCH | 105 | 472 | 5.80E-52 |
| PF13423.9 | UCH_1 | 104 | 444 | 1.40E-11 |
| PF00240.26 | ubiquitin | 3 | 73 | 2.50E-09 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | USP |
| GO term | Description | Category |
|---|---|---|
| GO:0004843 | cysteine-type deubiquitinase activity | Molecular Function |
| GO:0016579 | protein deubiquitination | Biological Process |
| GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process |
| GO:0070628 | proteasome binding | Molecular Function |
| GO:0061136 | regulation of proteasomal protein catabolic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR029071 | Ubiquitin-like domain superfamily |
| IPR000626 | Ubiquitin-like domain |
| IPR018200 | Ubiquitin specific protease, conserved site |
| IPR028889 | Ubiquitin specific protease domain |
| IPR019954 | Ubiquitin conserved site |
| IPR044635 | Ubiquitin carboxyl-terminal hydrolase 14-like |
| IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase |
| IPR038765 | Papain-like cysteine peptidase superfamily |
| trEMBL term | Description |
|---|---|
| A0A8B8JUL9 | _ |
| SwissProt term | Description |
|---|---|
| UBP6_ARATH | Ubiquitin carboxyl-terminal hydrolase 6 |
| KO | Description | Enzyme |
|---|---|---|
| K11843 | ubiquitin carboxyl-terminal hydrolase 14 | [EC: 3.4.19.12] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G51710 | ubiquitin-specific protease 6 |
| Medicago sativa L. | MsG0880042524.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g36930.1 | ubiquitin carboxyl-terminal hydrolase 6, putative, expressed |
| Cucumis sativus L. | Csa009984 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000021s00002713.1 | _ |
| Codonopsis lanceolata | Cl_C02953_unscaffolded_00050T | _ |
| Arachis hypogaea L. | AH09G04370.1 | Ubiquitin carboxyl-terminal hydrolase 6 like |