Gene detail

Detail information of Am01G001890.1 Annotation

Gene ID	Annotation
Am01G001890.1	multidrug resistance-associated protein 6

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G001890.1	mRNA	Chr01	6643602	6651570	+

Sequences

CDS:

>Am01G001890.1
ATGGCATATTTTTGGAGCTCACTGGGTGGATTTACATGGATTTGTGGAGAAGAATTTAATTTGGCTTCTTTCTGTGTTCAAAGAAGCGTAATAGATGGAGTGAACATTTTCTTCTTTTGTGTTCTATGCATATTAATGATGATAAATTTAGTTAGAAAAGACCATGCAAGTGACATCAATAGAAAGGACCACATTTTGGTGATTGCATCAGTCTGCTGTTTTCTTACATGCATCATGTTTTTTGGCTATGTTCTATATAATCTCATAGATGAAAATGAAGAATCAGATGCTTTAAGTTCAGTTCTAAGAGGACTAGTTTGGACCACTCTTGTTGTTTCGTTAGCTACACAAAGAAGTAAATGGATTATGTATCTAAATTCCATTTGGTGGGTGTGCTTATGTGCACTACTTTCAGCTCTAAATATTGAAATTATTCTAATAGATCACACTATTTCTATGTTTGATTTGTTTCCTTGGCTTGTAAGTTTCATTCTTCTCATTTGTGCTTTTAGAAACCATGGTTACTTCATTTCAAAACATTACCAATACAACACAATCTTTGAAGAACCATTGTTGAGTGAAACCAAAAAGGTAGAAATAAGTCAACCAGGGTTAAGCCAAGCCAATTTTCTCAGCAAATTGACATTTTCTTGGCTTAATCCTTTACTCTCTTTGGGTTATATAAAGCCATTAGCTCTTGAAGATATTCCTTCTCTTCCTCTTGAAGATAAAGCTAGCACTTGCCACCAAAGATTTGCAAGAGAATATTTGAAAGAGAATAGTAGCTCAAATAGTCCTAAGAATTTAGTTATCTTGAGCATGTCAAAAGCATTTTTGAAGGAGAATGTTTATATAGCAATATGTGCATTAGCTAGGGCTATTTGTGCTGCAGCTGCTCCTGTTTTGGTATACTCCTTTGTTAACTACGCGAGTCGCGATGAACTCGACTTTTATGAGGGTCTTTCTTTATTGGGATGGTTGGTTCTTGTGAAATTGGTAGAGGCTGTGAGTGAGAGACAATGGTATTTCGAATCGAAGCGATCAGGGATGAGAATGAGATCGGCGTTAATGGTAGCTGTGTATGAAAAACTGTTGAAGCTTTCGAGTTTGGGAAGGAAAAAGCACTCAACTGGGGAGATTGTGAATTATATAGCAGTTGATGCTTATAGAATGGGAGAATTCTTGTATTGGTTTCATTCATCATGGAGTTTTGTTTTGCAAATTTTCTTAGCTATTGGTGTTCTTTTTTGGGTTGTAGGACTTGGTGCTCTACCTGGTTTGTTTTTTATCTTCATATTTGGAATCTTCAATGTTCCTTATGCAAAGAGGATCAAAACTTGTAAGTCACAAGTACTAATTTCACAGGATCAAAGACTAAGGTTAACTTCAGAGATTCTTAACAACATTAAAGTCATTAAATTACAAGCTTGGGAGGATAAGTTTAAGAACATGGTTGAGTCGCTTCGAGCTAGCGAATTCGAATGGTTGGGAAAGACTCAGTTCACAAAGGCTTTAGGATCTATTTTGTATGTTTCTCCAGCTATTATTGGTGCAGTTGTTTTAATAGGATGTACTCTCTTTGGAACTGCTCCATTAAACGCTGCTACGATCTTCACGGTTCTCGCGACGCTGAGAAGTGTCGCAGAACCTGTGAGGTTCTTACCTGAGGCTGTTTCTGTTATTATCCAAGTTAAAGTCTCATTTGATAGGCTAAACACTTTTCTCCTTGATCATGAGCTAAGAACTTTTCAAGAGAAGAGCATTTCTGGTTTAAAATCTGACTTATGCATTGAAATAGAGGCTGCTGATTTTAGTTGGGATGAGGATATAGTGAATCCAACTTTGAGTGACATTACTTTATGCATCAAAAGGGGGCAAAAAGTAGCAGTTTGTGGTCCAGTTGGATCTGGAAAATCTTCTCTACTTCATGCTATTCTTGGAGAGATGCCTAAAATTTCAGGAACTGTTAATTTGCATGGAAAAGTAGCCTATGTTTCTCAAACTCCTTGGATCCAAAGTGGGACAATTCAAGATAACATACTATTTGGAAAATCAATGGACAGAAATAGATATGAGAATGCTATCAAAGCATGTGCTTTAGACATGGATATAAACGGTTTTCGCCACGGAGATCTTACGGAAATAGGCCAAAGAGGAGTTAACTTGAGTGGAGGGCAGAAACAGAGAATTCAACTTGCACGTGCTATTTATAGTGATGCTGATGTATATCTTCTTGATGATCCTTTCAGTGCAGTTGATGCACATACTGCTGCAGTTCTATTCCATGAATGTGTCATGAATGCTCTCAGAGAGAAAATAGTCATCCTAGTGACTCATCAAGTAGAGTTTTTAACAGAAGTTGATAAAATTCTGGTTATGGAGGGTGGGCGTATTACTCAAGCAGGAAGCCATGAAGAGTTGATGAAATCTGGGGAAACCTTTGAACAACTTGTGAATGCTCATAGAGATGCAATAACTATAATAGGCACAAGTTATCAAAACCAAGAAACAAATCAAGTAGATAAAGTCAATATTGAAGAAAGGCATCATGGAAGTGATCCTGCTAAAGAAAACAATAATGAAGAAATAAGTGAGACAAGTTCTGAAGGGCAACAACTTACAAAAGAAGAGCACAGAGAAATGGGAAGTGCTGGATGGGAACTGTTCTTGGACTATATTATAATCTCCAAGGGATTACTTCTTCAGTTTTTAAGTTTAGTGGCTCTGATGGGTTTTGCTGTTTTTGCGGCTGCGGCGTCTTATTGGCTAGCTATAGCTAGTGAAATTCCAGTAATCTCTAGTGGAATGTTGGTTGGAGTTTACACTGCAATGTCAGTTATTAGTGCCGTGTTTGCTTACTTGAGGTCTCTTTTGGCAGCTCAATTTGGACTAAAGGCTTCTAAAGCCTTCTTCTCAGGTTTCACTTCTGCCATTTTCAATGCTCCCATGTCATTCTTTGACTCAACTCCCGTCGGAAGAATTTTGACAAGAGCTTCATCAGATTTGGATACTTTAGACTTTGATTTGCCTTTTGCCATAGTGTATGTGGCACAAAGTGGAATTGTTCTTCTATCAGGAATTTTGATCATGGCTTCAGTCACATGGCAAGTTGTTATAGTTGCCATTCTAGCTGCAATAGGAGGATACTATATTAAGGGATACTATCAAGCATCTGCAAGGGAATTGGTAAGAATCAATGGAACAACAAAAGCTCCAATTGTGAGTAATACAACAGAAACATCAGCAGGAGTTGTCACAGTAAGAGCTTTCAATATGGTGGACAGATTCTTCAAAAACTTCTTACACTTAGTTGACATAGATGCTGCATTATTCTTGCATACTAATGCTTCTTTGGAGTGGTTACAAACAAGAATGGATATACTTCAAAATTTGATTCTTTTTGTTGCAGCTTCTTTATTTGTGTTTGTTCCTGAGGGATCATTATCTCCGGGCCTTGTAGGTCTTTCTCTCTCTTATGCTTTGGCATTGACAAGATCACAAATGTACTTTACTACATGGACTTGTAACTTGTCAAACTACATCATCTCTGTGGAAAGAATCAAGCAATTCATGCAAATACCACAAGAGCCTCCAAGAGTATTAGAGGATAAAAGACCACCATCCTCATGGCCTTCAAAGGGCAGGATAGAGTTCCAAGATTTGAAGGTTAGATATCGTCCAAATGCTCCACTAGTTTTAAATGGAATCACATGTACTTTCAAAGAAGGAACTAGAGTAGGAGTTGTGGGAAGGACTGGGAGTGGGAAAACAACACTTCTAAGTGCATTGTTTCGTTTGGTAGAGCCTACAAGTGGTGAAATTATCATAGATGGACTTAACATATGCTCAATAGGCCTGGGGGATTTAAGAATGAAGCTAAGCATCATTCCTCAAGAACCCATTCTTTTCAGGGGTAGTGTTAGAACCAACTTGGATCCACTAGACCAATTCTCTGATGATGAGATATGGAAGGTTTTAGAGATGTGTCAACTCAAGGAGGTTTTACGTGGACTACCACATCTTTTGTACTCATCAGGTAAGTTGCATTCATCAGGCAAAGCATGGAGTTCATTGTGTAACTGGTAA

Protein:

>Am01G001890.1
MAYFWSSLGGFTWICGEEFNLASFCVQRSVIDGVNIFFFCVLCILMMINLVRKDHASDINRKDHILVIASVCCFLTCIMFFGYVLYNLIDENEESDALSSVLRGLVWTTLVVSLATQRSKWIMYLNSIWWVCLCALLSALNIEIILIDHTISMFDLFPWLVSFILLICAFRNHGYFISKHYQYNTIFEEPLLSETKKVEISQPGLSQANFLSKLTFSWLNPLLSLGYIKPLALEDIPSLPLEDKASTCHQRFAREYLKENSSSNSPKNLVILSMSKAFLKENVYIAICALARAICAAAAPVLVYSFVNYASRDELDFYEGLSLLGWLVLVKLVEAVSERQWYFESKRSGMRMRSALMVAVYEKLLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFLYWFHSSWSFVLQIFLAIGVLFWVVGLGALPGLFFIFIFGIFNVPYAKRIKTCKSQVLISQDQRLRLTSEILNNIKVIKLQAWEDKFKNMVESLRASEFEWLGKTQFTKALGSILYVSPAIIGAVVLIGCTLFGTAPLNAATIFTVLATLRSVAEPVRFLPEAVSVIIQVKVSFDRLNTFLLDHELRTFQEKSISGLKSDLCIEIEAADFSWDEDIVNPTLSDITLCIKRGQKVAVCGPVGSGKSSLLHAILGEMPKISGTVNLHGKVAYVSQTPWIQSGTIQDNILFGKSMDRNRYENAIKACALDMDINGFRHGDLTEIGQRGVNLSGGQKQRIQLARAIYSDADVYLLDDPFSAVDAHTAAVLFHECVMNALREKIVILVTHQVEFLTEVDKILVMEGGRITQAGSHEELMKSGETFEQLVNAHRDAITIIGTSYQNQETNQVDKVNIEERHHGSDPAKENNNEEISETSSEGQQLTKEEHREMGSAGWELFLDYIIISKGLLLQFLSLVALMGFAVFAAAASYWLAIASEIPVISSGMLVGVYTAMSVISAVFAYLRSLLAAQFGLKASKAFFSGFTSAIFNAPMSFFDSTPVGRILTRASSDLDTLDFDLPFAIVYVAQSGIVLLSGILIMASVTWQVVIVAILAAIGGYYIKGYYQASARELVRINGTTKAPIVSNTTETSAGVVTVRAFNMVDRFFKNFLHLVDIDAALFLHTNASLEWLQTRMDILQNLILFVAASLFVFVPEGSLSPGLVGLSLSYALALTRSQMYFTTWTCNLSNYIISVERIKQFMQIPQEPPRVLEDKRPPSSWPSKGRIEFQDLKVRYRPNAPLVLNGITCTFKEGTRVGVVGRTGSGKTTLLSALFRLVEPTSGEIIIDGLNICSIGLGDLRMKLSIIPQEPILFRGSVRTNLDPLDQFSDDEIWKVLEMCQLKEVLRGLPHLLYSSGKLHSSGKAWSSLCNW*

Promoter(3k):

>AM01G001890.1
ATTATATATATTAATTAATGTTTATTATTTATATTAATAATTAGTTATTTATTTGTTGGGTTATTTTTTCAGGAGAGCTTCGAGGGTGGGATGGCTGAGTACCATCAGTCACAACAGGGCAGTGGGGCAGCTGTCGATCCAGTGGAGGAGGCTAGAGTAGCTCGTGATGTTTGGGAGAGAGCAGTTGGTCCCCAAAAGACTAATCGTCTGGTAGGATTAGGTGGTATTGGACTGGCTGCTTTTCGAACAAGCATTATTCCGAGTCTATCAGATTCACATTCTGGATCCTCGACTGGTCGCAATTATGTTCCCAATGCTGGTGAGTTGAATGAGGTTAGGCAATTGACGCAGCAACTGAGCGAGGCTCAGCGTCAGATTGCCGAGCGGCAGCAGCAAAGCGATCGGGAAATTCAGGCGATTCGGGATCGAAGTGAGCCGGAAATTCAGGCGATTCGGGAGCATGCTAGGGTAGCTGAGGAGCGCATGGAGGAGCGCTTTAAGTTCTTGCAGGATCAGATGGTGTCTAGCTCGAGGCCATCCTCATCAGCATCCTACCCGCCGCCGCCACAGCAGCAGTACTACCAGCAGCAGTATGCACCCCAGTATCCCCCGCCGTATGCATCCCAATATCCCCCGCAGTATACACCGCAGTATGCGCCGCCATTCCAGCCATACCAGCAGCAACATCAGTCACCCCGCCAGCCATACCAGCAGCCCCAACATCAGTCACCCCTGATCCAGCCAAACCAGCAGTACCCCCAGCAGCGGTCACCCCCGCTGGACATTGATTTTAATGTCCAAATGTCATCGCTCAGTGCTTTACTTCAAGATGATACATATTATAATAATGTTGATGACATTGACCGGCAGGCACCCCAGTAGCTTTAGATTATTTTATTTATTTGTCTGGATATTTTATTAATTGTCTGGATATTTTATTAATTGTATGGATATTTTTACTGCTTTTCCCAATTTTTATTTTTTTAAATTAAAAATTAATTAGTTATTAGATTTTATTTTTTTATCAATAATTAAAAAAATTAATAAAATAATATATATTTTTAATTAAAACGATTTTTTTAAAAAAATAAAATTTATTTTTTAAAAATAATAATAATTTTTTTTTAAAAAAAATGGTACTTTGCGGCGGATTTGTGTCGTTTGCGGCGGAATTTTAAATAAAACGTTTTTTTAAAAAAATTATATTCATTTTTTTAAAAATAAAACGGGTGTTTTGCTGCGGATAAGGGGTACTTTGCGGCGGATAATTTGCGGCGGATAAGGGGTACTTTCCGGCGGATATATTGCGTCAAAAACTTGTCCCCTTTTCCGGCGGATTATCCGCCGCAAATTTGCGTTGGATTTTGCGGCGCCACTAAATCCGCCGCAACGCGTTTGCTTCGAGCTGGCTACCGGCGAAAAACTTCCGCCGCAAAGTCCAAATATCCGCCGCAAATTTGGCTTTTGCGGCGGATTTCGCCCGCCGCAAAGTCCAACTTTTCTTGTAGTGTAGGTCATCCCTTTAGCCTAGTGTTTTGGGTTGGATTAGGCTAAAAAAATACAGTCCAGTAAATAATTGGGTTGACCCAACCCACTAATGCTGGTAAATTTATTCCTACATTGAGGCATACACCTAACATGATGACAAAGATGATGATTTTTGAGCTTGTAGCGAAATAGGGTGTTAAGTTGACACATGATCAAGCATATAGAACCAAGAGAAGAGCAACAGAAATGATTCAGGTGATTTGGAAGTGAACAATACTTATTTTCAAAAGCTCTCTAGAATAACTTACGAAAACAACTTAAAACTTACATGAAAAATGATTTGACTTGATTTTATCTTTTATTATAAAAATAATTTATACATGAACCCCTTATATGAGGAGAGTTTATGCTATAAACTTTAATTTAGGTGTTTATCAAAAAGGGTTATTGAGTCAATGTTTATAGCACGTGATGTGTCGGTACCCAAAAATACCTGCCAACTTATTAGCTGTGTGGGTACTACATACTGAAAAATTGCCAACTAATTAATTAACTCTCTTCAATGGAATAAGTCACACAAGTTTGTGGGTGCAAAAAATACACACAATATACTTGTGTTCTAATACTGCTTTATGTCAACTTCTTTGAATTAGTTAGGAATGGGTTGCCAGAATTTTGGACGTTGGACACATTTCTGTCAGATGATGCAATAAAAGAATAGAACACAGATTTACAATAATTAATAAATTATAAAATTAGTGAAATACATTCTGATGATTATATAATTTGTTCACAATCACAATTAATTTTTTTAATTAAAAAATATAACTATAATTTTTCTTTTAGAATGTAATAACTCTCTTGCACGACAATTTTTTTAAATGTTATGTCAATTGAATTAATTTCAACTGCCCGAAAAATCAAAACAACCAACTGTTATTGGTTTGGAGTTACAGAATTTGTTTGCATTTTTCAGTGAAGAAGGTTGTTATTAATGGAACCACTACCCATACCTATTAATTTCTACCAAGTGCGAGCTTTAAGAGAGCTTCGATCTCACCTCAAGGCCTCGGATTCGAATTTTGGGTGTGGCGAAAAACTCTATTGGGAGGAGAGAATCACACGGACCGACAAAACTGGGTATACACGTGACCAGCCAGCCAGACTCCCTGGCGTAAATTAGTCACCGGCTTTTCGGTGGATGCTGCACACTAATAACACGGTAACAAAAAAAATACCTAATAATTTCTTAATTATCATAGTTATTTATATAATTATTTTTCATCTTTTTGTATTTCTAAAATTGTTTTTTGGTGAATATCTTTTTGTATATCCAAATACTACGACTGGTAACAACCCTTATTACATGTGACATAATAAAGTCCACTCATCTAAATCTAAATTTATTAATTGTCCATGTGTCCCTCGCTCACTTCCTTTTTGGTGCAACATAAATAGGCTTCTGTGCAGCAAGAAGCAGCAAAAATGAATCATTTCAAGTCTTCCCAAGTA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00664.26	ABC_membrane	285	543	5.40E-46
PF00664.26	ABC_membrane	904	1164	5.40E-46
PF00005.30	ABC_tran	615	749	5.40E-42
PF00005.30	ABC_tran	1233	1334	5.40E-42

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005992	trehalose biosynthetic process	Biological Process
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR036640	ABC transporter type 1, transmembrane domain superfamily
IPR011527	ABC transporter type 1, transmembrane domain
IPR044726	ABC transporter C family, six-transmembrane helical domain 2
IPR044746	ABC transporter C family, six-transmembrane helical domain 1
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A072TXR9	_

SwissProt

SwissProt term	Description
AB8C_ARATH	ABC transporter C family member 8

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G21250	multidrug resistance-associated protein 6
Medicago sativa L.	MsG0880042542.01.T01	_
Oryza sativa L.	LOC_Os05g10730.2	ABC transporter, ATP-binding protein, putative, expressed
Cucumis sativus L.	Csa009919	_
Glycyrrhiza uralensis Fisch.	Glyur000021s00002722.1	_
Codonopsis lanceolata	Cl_chr03_52990T	_
Arachis hypogaea L.	AH09G04980.1	ABC transporter C family member 8 like

Expression pattern