Gene detail

Detail information of Am01G001050.1 Annotation

Gene ID	Annotation
Am01G001050.1	Duplicated homeodomain-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G001050.1	mRNA	Chr01	4000173	4001485	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G001050.1
TAACAACTTTGATCATCAATGTCACAAGAAAGATTGAATGGTTTGACAACTTTGTCAATTGAGAAGAATATGTTGGAGAGAACATTGATGTTGATGTGATTATAAATGATTTTGCATCTCAAAATGCTCGAAAAAACCGTTTCTTATGACTTTCCGATAAAAGAGAAGTTTTTTGATATTTTGTAAGACTATTATAATGTATTAAGGTGTATTATGTTAAATGAAATAAGTTATTTTTTTTGTCTTTTATTGAAATATTTACAAATTAAAAAATAGTTATGTAGGGGGGGCTTTTCTCACGATTTGCCTAAGACCCATAAAATGTCAGGAACGGGTACAAAATATACATTCACTACAAAAAAAAAGCAAATTGCGACAGTTCTAACCAGCATATTGCGACGGTTGCAAAATCACTGTAGTTACATTTGTCGGGAGATTATTCTACAACAATTTAAATGAACCATGTGAATAACCGCCTACAAGTTTTAGCGACAAATTTTATTTGGTGGCAGTTTTAGCAACAATTTGTAACCGCCGCAAAAGCATTCTTGAATCTACAACATTTTAAATATTGCAGTGGTTTAGGAATCATTTTGTGGCGGTTTGTAACTTTTGCTGCGGTTTGAACCGCCTCTATAATTTGTTTTATACATGTTGGTTATCACCACCATTATTTTGTTGGGTTACCATGTCATTGGTGCGCAATATCCACCGGCTTTGCCACAAGTATCCGGTTTTGCAGGCTCATGTGGTTCTCCCCAGTTGCAGGCTCGGACCAGTCTTTATTGGAAGTTATCACCATTATTTGTTAACGAAAGAAAAGATTTCTATAAATGAGTACACTAATAATTACACCTCTAATGAAAATCACATAAAATATATAATGTCAATCAAGTGACAACGAACCATATTTAATGAAGCCATTTAATAGTAACTCGTTTAAATTTGAAGAAGCAACCCAAGTTTTCCTAAAAGAAAAAAAGTTGGAACTTTATATACTTCTATGTGGGTTTTTATTTCACAAATCACAACCCATAAGAGGTGAGAAAGGTTTCCAATGCATGTGGGACACAAAGGCAACACTATGAGTTGTTGGTTGGTCCCCTCCCTTGTACGAGGAGTACGACACGCAATGCTAGCTAGCTTCTTCATTCATTCAAGCCTTTTGTTTTCATTTTCTTTTTTCATATTTGTATATTAACCGGTAGGATACACGTGCATATGCACGGGTGCTATCGTGCTACTTTTATGAATGATTTTAGACAGTATTTAAATAGTTTGAACATTACCCCGTGAAAATAAAGACAAATTTAAAGTTAGATAAAAAATGAGTTTAAAAAAAATAGATAAATATTAAAATCTAAAAATGTAAAAGTATCATTTAAAAACAATATGTGCATTTATCCCGTATTTTTTTTATATATCAGTGCAGTGTTTTTTTATATATCAGTGTTGTTATCTCGTGTTTTTATATATTAGTGCAGCTATTCCGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATTTATATATCATTGCAGTTATACCCATATTTTTTTATATATCAGTGCAATTATCTCGTGCTTTTTAATGTATCAGTTGCAGTTATCTCATAGTTTCAATTGATTATTTGAGTTGATTAATAGATTATAGTAGATAGTAAAAGATAGATAGTAGATTATTAATAAGAAATATTTATCCCGTGTTTTTTTGTATATCAGTAACAATTATTTATCCTTTTTTAGGTATTAGTGACAAATATTTGTCGCGTGTGTTTAAAATATTAATCAGTTTAAATAGTCATTAAGCCTTCTTGTTTTATTAGATAGTAGGTTTATAGTAGTTTCCAAAAATTATAATTATCAATGACAAATATTAATCCCGTATTTTTTTATATATCACTGCAGTTATCCCGTGTTTTTATATATCAGTGCAGTTATCTGGTAGTTTCAATTGAGTATTTTAGTTGATTAATAGATTATAGTACATAGTAAATTTGTTAGATAGTATTATCAATAAGAAATAATTGTTTTAAATATTAATTAGTAGTTTAAATAGTCATTAAGTCTTCTTGTTTTTAGATAGTAGGTTTGTAGTAGTAGTCTTCAAAAAATTTAATTATCAATGACAAATATTAATCTCGTGTTTTTTTTATATATCAGTGCAGTTATCCCGTGTTTTTTATATATCAGTACAGTTATCTCGTAGTTTCAATTGATTATTTTAGTTGATTAGTACATTATAGTAGATAGTAAAAGAGAGATAGTAGATTATCAATAAGAAATATTTGTTTTAAATATTAATCAGTAGTTTAAATAGTCATTAAATATTATTGTTTTTTAGATAGTAGGTTTATAGTAGTCTTCAAAAATTTTAATTATCAATGACAAATATTAATCCTGTGTCTTTTTATATATCAATGCAGTTTATCCCGACCTTTTTAATGTATCATTGCAGTTATTCCATAGTTTCAATTAATTATTTGAGTTGATTAATAGATTATAGTAGATAGTAAAAGATAGATAGTAGATTATTAATAAGAAATATTTATCCCGTGTTTTTCTTTATATATCAGTAACAATTATTTGTCCTTTTTTAGGTAAGAAGAAAGAGAGTATAAGAAGAAAGAGAAAAAGGAAGAAAGGGAGTGTAAGAGAAAAGTGAAAAGTAAGAAAAACAGTGTAAGAAGAAAGAGGAAAAAAAAATAAGAAAGAGAGTGTAATGACATTTTTACCCTTAAATTAGATATGTGTCTTGTTAACAAGAGATCCAAATTGGTAATTTCTTATAAATAGATAAATAGATATTAGATGACTCTGAATAGTGGATCCATGAGAAATTGGAAAGTACATTTTCCTAAAGATGTGTAATAATAAAGCCAAGCCACCAGTCATTATTATTTTTTATGTATGGCAGTGATGAAGAAAAGTGTTTTTGGGTTATAAGCAACTAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	13	60	1.90E-31
PF00249.34	Myb_DNA-binding	66	111	1.90E-31
PF13921.9	Myb_DNA-bind_6	16	74	3.20E-19
PF13921.9	Myb_DNA-bind_6	70	125	3.20E-19

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0030154	cell differentiation	Biological Process
GO:0000976	transcription cis-regulatory region binding	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A8B8JSI7	_

SwissProt

SwissProt term	Description
MYB1_CROXC	Transcription factor MYB1

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G35550	Duplicated homeodomain-like superfamily protein
Medicago sativa L.	MsG0880047347.01.T01	_
Oryza sativa L.	LOC_Os03g29614.1	myb-like DNA-binding domain containing protein, putative, expressed
Cucumis sativus L.	Csa016768	_
Glycyrrhiza uralensis Fisch.	Glyur000052s00005773.1	_
Codonopsis lanceolata	Cl_chr06_07870T	_
Arachis hypogaea L.	AH09G09220.1	Anthocyanin regulatory C1 protein like

Expression pattern